Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CDYLP1-201ENST00000419017 1458 ntBASIC8.68□□□□□ -1.02
FOXR1Q6PIV2 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
FOXR1Q6PIV2 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
FOXR1Q6PIV2 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
FOXR1Q6PIV2 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
FOXR1Q6PIV2 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
FOXR1Q6PIV2 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC8.68□□□□□ -1.02
FOXR1Q6PIV2 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
FOXR1Q6PIV2 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
FOXR1Q6PIV2 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
FOXR1Q6PIV2 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
FOXR1Q6PIV2 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
FOXR1Q6PIV2 SYNPR-212ENST00000479198 2436 ntTSL 5 BASIC8.68□□□□□ -1.02
FOXR1Q6PIV2 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 ARHGAP42P5-201ENST00000548856 2936 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 PRYP4-201ENST00000306589 444 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 RN7SKP25-201ENST00000362449 308 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 VSIG4-201ENST00000374737 1834 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 Y_RNA.516-201ENST00000384541 124 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AL355615.1-201ENST00000406187 641 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 RN7SKP264-201ENST00000411080 289 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 NFU1P1-201ENST00000413128 774 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 MIATNB-201ENST00000417083 706 ntTSL 3 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AC011233.1-201ENST00000422812 283 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AL365203.2-201ENST00000423444 196 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 MTND4P20-201ENST00000424125 869 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AC116609.1-201ENST00000425850 535 ntTSL 4 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AL161638.2-201ENST00000427319 507 ntTSL 3 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AL590094.1-203ENST00000435649 828 ntTSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AL513321.1-201ENST00000441175 761 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 FP325330.1-201ENST00000457518 372 ntTSL 3 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 RN7SL28P-201ENST00000488836 298 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AC020937.1-201ENST00000519677 1013 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 MED30-204ENST00000522839 476 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AC011379.2-201ENST00000523154 583 ntTSL 4 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 IGLVI-70-201ENST00000523272 390 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 TRIM53CP-201ENST00000531490 1354 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 NBPF5P-202ENST00000545941 1032 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 COX5AP2-201ENST00000554418 394 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AC093249.3-201ENST00000562444 424 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 OOSP1P2-201ENST00000579644 351 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 RN7SL118P-201ENST00000580570 302 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 ZNF793-AS1-205ENST00000589025 560 ntTSL 2 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AC011416.3-201ENST00000603971 355 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AC005034.5-201ENST00000604219 466 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 PRYP3-202ENST00000607210 444 ntBASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 CU633967.1-202ENST00000623449 560 ntTSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 CU639417.5-201ENST00000623983 476 ntTSL 3 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 GOSR2-240ENST00000640621 3059 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
FOXR1Q6PIV2 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms