Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 MIR181C-201ENST00000384881 110 ntBASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 Z83313.1-201ENST00000433780 718 ntBASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 SS18L2P1-201ENST00000445923 213 ntBASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 PYM1-204ENST00000454792 884 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 RN7SL549P-201ENST00000478997 282 ntBASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 OR7E83P-201ENST00000511021 970 ntBASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 GCSHP1-201ENST00000512554 484 ntBASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 AC008677.3-201ENST00000519146 666 ntBASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 AP005597.2-201ENST00000526238 341 ntBASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 EIF4EBP2P2-201ENST00000563883 333 ntBASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 IGHV1OR15-3-201ENST00000564926 351 ntBASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 AC138749.2-201ENST00000566048 167 ntBASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 AC007136.1-201ENST00000589141 199 ntBASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 MIR6762-201ENST00000613340 86 ntBASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 TRIM60P14-201ENST00000513444 1419 ntBASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 MXI1-204ENST00000369612 879 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 NXT2-204ENST00000372107 937 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 SNORA2C-201ENST00000408564 137 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 SNX18P3-201ENST00000424993 835 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AC005040.1-201ENST00000437783 482 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 LIN28AP2-201ENST00000445283 458 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 SUMO2P10-201ENST00000452006 288 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AC022730.2-201ENST00000465359 452 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 RN7SL180P-201ENST00000466769 294 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 RPL34P22-201ENST00000468193 318 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 OR7E96P-201ENST00000530816 976 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms