Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC234772.1-201ENST00000377927 937 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 LRRC37BP1-201ENST00000398851 714 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AL158050.1-201ENST00000416077 457 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 RPL12P19-201ENST00000429825 486 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 SOCS5P1-201ENST00000440415 949 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 KATNBL1P3-201ENST00000443475 909 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 LRRC37A14P-201ENST00000452297 462 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 RNU7-157P-201ENST00000459600 66 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 RPS17P11-201ENST00000474297 293 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC100843.1-201ENST00000475372 550 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 MYADML-203ENST00000491596 951 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AL645924.2-201ENST00000508865 900 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 SCARNA20.3-201ENST00000516913 131 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 RPL10P19-201ENST00000519013 301 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC013652.1-206ENST00000558277 789 ntTSL 2 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC092868.3-201ENST00000560515 784 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 MRPS21P9-201ENST00000571150 257 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 SKA2-203ENST00000578105 689 ntTSL 2 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 DHFRP1-201ENST00000579682 559 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC087393.2-201ENST00000580962 504 ntTSL 3 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 SETP3-201ENST00000581726 813 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC021382.2-201ENST00000584547 922 ntTSL 3 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AL358394.3-202ENST00000599308 832 ntTSL 5 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AL022067.1-201ENST00000602426 454 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AL160237.3-201ENST00000604114 1013 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC114810.1-201ENST00000607415 473 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC021851.1-201ENST00000608537 1082 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC231759.1-201ENST00000616455 597 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 EIF5P2-201ENST00000618904 1035 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 OR9M1P-202ENST00000641564 3163 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 TARS2P1-201ENST00000506124 2041 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 TOPORSLP1-201ENST00000467693 2102 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 AC005261.6-201ENST00000623072 1387 ntBASIC8.06□□□□□ -1.12
PHC3Q8NDX5 CDY1B-202ENST00000382407 2227 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PHC3Q8NDX5 FBXO9-203ENST00000370939 1580 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 EEF1A1P15-201ENST00000395772 1408 ntBASIC8.05□□□□□ -1.12
PHC3Q8NDX5 MFSD8-220ENST00000641243 1422 ntBASIC8.05□□□□□ -1.12
PHC3Q8NDX5 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 HMGB3P19-201ENST00000403971 560 ntBASIC8.05□□□□□ -1.12
PHC3Q8NDX5 MIR1272-201ENST00000408106 129 ntBASIC8.05□□□□□ -1.12
PHC3Q8NDX5 LSM5-206ENST00000409987 504 ntTSL 5 BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 AL023755.1-203ENST00000422253 519 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 ATP5G1P5-201ENST00000429024 411 ntBASIC8.05□□□□□ -1.12
PHC3Q8NDX5 RPL12P4-201ENST00000432629 497 ntBASIC8.05□□□□□ -1.12
PHC3Q8NDX5 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC8.05□□□□□ -1.12
PHC3Q8NDX5 CLUHP5-201ENST00000438421 774 ntBASIC8.05□□□□□ -1.12
PHC3Q8NDX5 Z99127.2-201ENST00000441426 334 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms