Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RPS7P11-201ENST00000484240 586 ntBASIC9.16□□□□□ -0.94
COL15A1P39059 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC9.16□□□□□ -0.94
COL15A1P39059 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC9.16□□□□□ -0.94
COL15A1P39059 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC9.16□□□□□ -0.94
COL15A1P39059 RN7SL126P-201ENST00000616400 299 ntBASIC9.16□□□□□ -0.94
COL15A1P39059 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC9.16□□□□□ -0.94
COL15A1P39059 AL390882.1-201ENST00000618821 594 ntBASIC9.16□□□□□ -0.94
COL15A1P39059 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
COL15A1P39059 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
COL15A1P39059 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC9.16□□□□□ -0.94
COL15A1P39059 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
COL15A1P39059 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC9.16□□□□□ -0.94
COL15A1P39059 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
COL15A1P39059 AC004023.1-201ENST00000561473 1744 ntBASIC9.16□□□□□ -0.94
COL15A1P39059 AL162171.3-201ENST00000617439 3178 ntBASIC9.16□□□□□ -0.94
COL15A1P39059 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
COL15A1P39059 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
COL15A1P39059 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
COL15A1P39059 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
COL15A1P39059 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
COL15A1P39059 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
COL15A1P39059 SNORD94-201ENST00000386037 137 ntBASIC9.15□□□□□ -0.94
COL15A1P39059 GGA1-205ENST00000405147 575 ntTSL 4 BASIC9.15□□□□□ -0.94
COL15A1P39059 AL353133.1-201ENST00000407695 401 ntBASIC9.15□□□□□ -0.94
COL15A1P39059 PRELID1P2-201ENST00000407805 396 ntBASIC9.15□□□□□ -0.94
COL15A1P39059 RN7SKP205-201ENST00000410999 307 ntBASIC9.15□□□□□ -0.94
COL15A1P39059 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC9.15□□□□□ -0.94
COL15A1P39059 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
COL15A1P39059 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
COL15A1P39059 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC9.15□□□□□ -0.94
COL15A1P39059 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC9.15□□□□□ -0.94
COL15A1P39059 AC022296.2-201ENST00000512424 202 ntBASIC9.15□□□□□ -0.94
COL15A1P39059 AC100854.1-201ENST00000520351 341 ntBASIC9.15□□□□□ -0.94
COL15A1P39059 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC9.15□□□□□ -0.94
COL15A1P39059 AC036176.3-201ENST00000602456 418 ntBASIC9.15□□□□□ -0.94
COL15A1P39059 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC9.15□□□□□ -0.94
COL15A1P39059 AL162377.2-201ENST00000624532 337 ntBASIC9.15□□□□□ -0.94
COL15A1P39059 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC9.15□□□□□ -0.94
COL15A1P39059 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC9.15□□□□□ -0.94
COL15A1P39059 CLUHP10-201ENST00000631979 980 ntBASIC9.15□□□□□ -0.94
COL15A1P39059 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC9.15□□□□□ -0.94
COL15A1P39059 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.94
COL15A1P39059 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC9.15□□□□□ -0.94
COL15A1P39059 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
COL15A1P39059 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
COL15A1P39059 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
COL15A1P39059 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
COL15A1P39059 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
COL15A1P39059 AC009163.7-201ENST00000621929 2557 ntBASIC9.15□□□□□ -0.94
COL15A1P39059 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC9.15□□□□□ -0.94
COL15A1P39059 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
COL15A1P39059 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
COL15A1P39059 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
COL15A1P39059 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
COL15A1P39059 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
COL15A1P39059 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
COL15A1P39059 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
COL15A1P39059 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC9.15□□□□□ -0.95
COL15A1P39059 AC010886.1-201ENST00000437380 2869 ntBASIC9.15□□□□□ -0.95
COL15A1P39059 AC067942.1-201ENST00000488045 1493 ntBASIC9.15□□□□□ -0.95
COL15A1P39059 CDY3P-201ENST00000454543 1618 ntBASIC9.15□□□□□ -0.95
COL15A1P39059 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
COL15A1P39059 RN7SKP174-201ENST00000363803 330 ntBASIC9.14□□□□□ -0.95
COL15A1P39059 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC9.14□□□□□ -0.95
COL15A1P39059 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
COL15A1P39059 TRBV29OR9-2-201ENST00000427589 333 ntBASIC9.14□□□□□ -0.95
COL15A1P39059 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
COL15A1P39059 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC9.14□□□□□ -0.95
COL15A1P39059 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC9.14□□□□□ -0.95
COL15A1P39059 AC117395.2-201ENST00000463122 1128 ntBASIC9.14□□□□□ -0.95
COL15A1P39059 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC9.14□□□□□ -0.95
COL15A1P39059 RPL10P18-201ENST00000519384 309 ntBASIC9.14□□□□□ -0.95
COL15A1P39059 AC024405.1-201ENST00000532521 1042 ntBASIC9.14□□□□□ -0.95
COL15A1P39059 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC9.14□□□□□ -0.95
COL15A1P39059 AC026367.2-201ENST00000610630 553 ntBASIC9.14□□□□□ -0.95
COL15A1P39059 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
COL15A1P39059 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
COL15A1P39059 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
COL15A1P39059 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
COL15A1P39059 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
COL15A1P39059 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC9.14□□□□□ -0.95
COL15A1P39059 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC9.14□□□□□ -0.95
COL15A1P39059 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
COL15A1P39059 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
COL15A1P39059 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
COL15A1P39059 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
COL15A1P39059 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC9.14□□□□□ -0.95
COL15A1P39059 LRRC37A17P-201ENST00000570311 4693 ntBASIC9.14□□□□□ -0.95
COL15A1P39059 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
COL15A1P39059 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
COL15A1P39059 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
COL15A1P39059 AC138207.6-201ENST00000579164 1967 ntBASIC9.13□□□□□ -0.95
COL15A1P39059 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
COL15A1P39059 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
COL15A1P39059 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC9.13□□□□□ -0.95
COL15A1P39059 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
COL15A1P39059 RPSAP60-201ENST00000415403 880 ntBASIC9.13□□□□□ -0.95
COL15A1P39059 AC234771.3-201ENST00000454984 622 ntBASIC9.13□□□□□ -0.95
COL15A1P39059 AC236972.4-201ENST00000458091 963 ntBASIC9.13□□□□□ -0.95
COL15A1P39059 AC004890.1-201ENST00000461005 181 ntBASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms