Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPIPA3F8WFD2 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 SAMMSON-203ENST00000641005 2168 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 RBMX2P2-201ENST00000257020 946 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 OR51A10P-201ENST00000307165 937 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 NUS1P4-201ENST00000401550 585 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 AL139806.1-201ENST00000403057 1002 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 FTH1P5-201ENST00000425761 545 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 VN1R35P-201ENST00000428102 693 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 SALL1P1-201ENST00000438101 3837 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 AC018892.2-201ENST00000457656 693 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 AC008040.4-201ENST00000494834 768 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 AC017007.1-201ENST00000511960 415 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 AC022296.2-201ENST00000512424 202 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 OR4C1P-201ENST00000530880 937 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 AL512430.4-201ENST00000603085 613 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 U47924.1-201ENST00000606539 434 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 RN7SL778P-201ENST00000607160 297 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 RN7SL680P-201ENST00000620379 299 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 AC027506.1-201ENST00000621395 198 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 HCG18-244ENST00000602516 2890 ntBASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPIPA3F8WFD2 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 AC016831.3-201ENST00000446451 1723 ntBASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 EEF1A1P22-201ENST00000559385 1380 ntBASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 RNA5SP35-201ENST00000391257 129 ntBASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 MEAF6P1-201ENST00000416092 327 ntBASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 RAC1P4-201ENST00000419413 579 ntBASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 AC092570.2-201ENST00000452117 1143 ntBASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 RPL7AP30-201ENST00000482859 796 ntBASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 RN7SL153P-201ENST00000486501 292 ntBASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 AL356800.1-201ENST00000553339 735 ntBASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.73□□□□□ -1.33
NPIPA3F8WFD2 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms