Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 AC008550.1-201ENST00000511500 884 ntBASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA4Q9Y5G9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 LSM12P1-201ENST00000411836 588 ntBASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA4Q9Y5G9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 AC006128.1-201ENST00000624704 1661 ntBASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGA4Q9Y5G9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA4Q9Y5G9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms