Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA6Q9Y5G7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 SOX15-203ENST00000570788 1093 ntBASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA6Q9Y5G7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGA6Q9Y5G7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
PCDHGA6Q9Y5G7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA6Q9Y5G7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA6Q9Y5G7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA6Q9Y5G7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA6Q9Y5G7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGA6Q9Y5G7 MIR718-201ENST00000390190 70 ntBASIC19.26■□□□□ 0.67
PCDHGA6Q9Y5G7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA6Q9Y5G7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA6Q9Y5G7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA6Q9Y5G7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGA6Q9Y5G7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGA6Q9Y5G7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA6Q9Y5G7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA6Q9Y5G7 AC006128.1-201ENST00000624704 1661 ntBASIC19.26■□□□□ 0.67
PCDHGA6Q9Y5G7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGA6Q9Y5G7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA6Q9Y5G7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 C1QBPP2-201ENST00000528754 825 ntBASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 C2orf69P4-201ENST00000565394 541 ntBASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 AC069544.1-201ENST00000609399 999 ntBASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 FAM197Y4-202ENST00000622692 608 ntBASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA6Q9Y5G7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 POM121L13P-201ENST00000422362 380 ntBASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA6Q9Y5G7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms