Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.82■■□□□ 1.4
SCAF8Q9UPN6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SCAF8Q9UPN6 AC006011.2-201ENST00000621313 1158 ntBASIC23.82■■□□□ 1.4
SCAF8Q9UPN6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.82■■□□□ 1.4
SCAF8Q9UPN6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCAF8Q9UPN6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SCAF8Q9UPN6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCAF8Q9UPN6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCAF8Q9UPN6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.82■■□□□ 1.4
SCAF8Q9UPN6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCAF8Q9UPN6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.82■■□□□ 1.4
SCAF8Q9UPN6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 KRT16P1-201ENST00000399124 1418 ntBASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCAF8Q9UPN6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF8Q9UPN6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF8Q9UPN6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF8Q9UPN6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.8■■□□□ 1.4
SCAF8Q9UPN6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF8Q9UPN6 AL024507.2-201ENST00000606070 2574 ntBASIC23.8■■□□□ 1.4
SCAF8Q9UPN6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF8Q9UPN6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
SCAF8Q9UPN6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF8Q9UPN6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF8Q9UPN6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.8■■□□□ 1.4
SCAF8Q9UPN6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.8■■□□□ 1.4
SCAF8Q9UPN6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.8■■□□□ 1.4
SCAF8Q9UPN6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 INGX-201ENST00000359239 846 ntBASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 KSR1P1-201ENST00000446298 240 ntBASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 ECEL1P2-202ENST00000465689 757 ntBASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 AL121603.2-201ENST00000557373 2117 ntBASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.79■■□□□ 1.4
SCAF8Q9UPN6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 MESTP1-201ENST00000404287 994 ntBASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF8Q9UPN6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SCAF8Q9UPN6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCAF8Q9UPN6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCAF8Q9UPN6 FBXW4P1-201ENST00000426721 2239 ntBASIC23.76■■□□□ 1.39
SCAF8Q9UPN6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SCAF8Q9UPN6 Z98882.1-201ENST00000622160 2253 ntBASIC23.76■■□□□ 1.39
SCAF8Q9UPN6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms