Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBQLN1Q9UMX0 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.52■■□□□ 1.04
UBQLN1Q9UMX0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.52■■□□□ 1.04
UBQLN1Q9UMX0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.52■■□□□ 1.04
UBQLN1Q9UMX0 AP006294.2-201ENST00000641667 209 ntBASIC21.52■■□□□ 1.04
UBQLN1Q9UMX0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBQLN1Q9UMX0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBQLN1Q9UMX0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBQLN1Q9UMX0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.52■■□□□ 1.03
UBQLN1Q9UMX0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
UBQLN1Q9UMX0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
UBQLN1Q9UMX0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 AC133681.1-201ENST00000465482 601 ntBASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 AC124016.1-201ENST00000609552 612 ntBASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 KRT16P6-202ENST00000425692 1426 ntBASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 SMG8-203ENST00000578922 2178 ntBASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 AC020907.5-201ENST00000624372 1936 ntBASIC21.51■■□□□ 1.03
UBQLN1Q9UMX0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBQLN1Q9UMX0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBQLN1Q9UMX0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
UBQLN1Q9UMX0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
UBQLN1Q9UMX0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBQLN1Q9UMX0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBQLN1Q9UMX0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBQLN1Q9UMX0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBQLN1Q9UMX0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBQLN1Q9UMX0 AC093827.2-201ENST00000512654 315 ntBASIC21.49■■□□□ 1.03
UBQLN1Q9UMX0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
UBQLN1Q9UMX0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
UBQLN1Q9UMX0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
UBQLN1Q9UMX0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
UBQLN1Q9UMX0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBQLN1Q9UMX0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
UBQLN1Q9UMX0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 KRASP1-201ENST00000407852 552 ntBASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 CLDN5-201ENST00000403084 2357 ntBASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBQLN1Q9UMX0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 AC073314.1-201ENST00000568729 2216 ntBASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms