Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.43■□□□□ 0.86
EBF1Q9UH73 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EBF1Q9UH73 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EBF1Q9UH73 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.43■□□□□ 0.86
EBF1Q9UH73 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.43■□□□□ 0.86
EBF1Q9UH73 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EBF1Q9UH73 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EBF1Q9UH73 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EBF1Q9UH73 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
EBF1Q9UH73 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.43■□□□□ 0.86
EBF1Q9UH73 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
EBF1Q9UH73 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EBF1Q9UH73 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EBF1Q9UH73 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
EBF1Q9UH73 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
EBF1Q9UH73 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
EBF1Q9UH73 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EBF1Q9UH73 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EBF1Q9UH73 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.42■□□□□ 0.86
EBF1Q9UH73 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
EBF1Q9UH73 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.42■□□□□ 0.86
EBF1Q9UH73 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EBF1Q9UH73 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.42■□□□□ 0.86
EBF1Q9UH73 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EBF1Q9UH73 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EBF1Q9UH73 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
EBF1Q9UH73 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EBF1Q9UH73 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EBF1Q9UH73 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EBF1Q9UH73 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EBF1Q9UH73 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EBF1Q9UH73 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.42■□□□□ 0.86
EBF1Q9UH73 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EBF1Q9UH73 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.41■□□□□ 0.86
EBF1Q9UH73 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
EBF1Q9UH73 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.41■□□□□ 0.86
EBF1Q9UH73 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.41■□□□□ 0.86
EBF1Q9UH73 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EBF1Q9UH73 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.41■□□□□ 0.86
EBF1Q9UH73 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.41■□□□□ 0.86
EBF1Q9UH73 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EBF1Q9UH73 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
EBF1Q9UH73 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
EBF1Q9UH73 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EBF1Q9UH73 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EBF1Q9UH73 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EBF1Q9UH73 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.41■□□□□ 0.86
EBF1Q9UH73 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.41■□□□□ 0.86
EBF1Q9UH73 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EBF1Q9UH73 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
EBF1Q9UH73 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EBF1Q9UH73 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
EBF1Q9UH73 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EBF1Q9UH73 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
EBF1Q9UH73 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EBF1Q9UH73 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EBF1Q9UH73 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EBF1Q9UH73 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EBF1Q9UH73 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.4■□□□□ 0.86
EBF1Q9UH73 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EBF1Q9UH73 RCN1P1-201ENST00000400413 996 ntBASIC20.4■□□□□ 0.86
EBF1Q9UH73 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.4■□□□□ 0.86
EBF1Q9UH73 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.4■□□□□ 0.86
EBF1Q9UH73 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
EBF1Q9UH73 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.4■□□□□ 0.86
EBF1Q9UH73 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.4■□□□□ 0.86
EBF1Q9UH73 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.4■□□□□ 0.86
EBF1Q9UH73 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.4■□□□□ 0.86
EBF1Q9UH73 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
EBF1Q9UH73 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EBF1Q9UH73 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.4■□□□□ 0.86
EBF1Q9UH73 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
EBF1Q9UH73 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
EBF1Q9UH73 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EBF1Q9UH73 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
EBF1Q9UH73 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.39■□□□□ 0.86
EBF1Q9UH73 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
EBF1Q9UH73 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
EBF1Q9UH73 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
EBF1Q9UH73 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EBF1Q9UH73 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EBF1Q9UH73 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EBF1Q9UH73 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.39■□□□□ 0.85
EBF1Q9UH73 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
EBF1Q9UH73 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.39■□□□□ 0.85
EBF1Q9UH73 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.39■□□□□ 0.85
EBF1Q9UH73 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.39■□□□□ 0.85
EBF1Q9UH73 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EBF1Q9UH73 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EBF1Q9UH73 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
EBF1Q9UH73 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
EBF1Q9UH73 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EBF1Q9UH73 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EBF1Q9UH73 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
EBF1Q9UH73 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EBF1Q9UH73 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
EBF1Q9UH73 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.38■□□□□ 0.85
EBF1Q9UH73 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EBF1Q9UH73 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EBF1Q9UH73 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms