Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MFAP1P1-201ENST00000442257 1255 ntBASIC32.24■■■□□ 2.75
RIMBP3Q9UFD9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC32.24■■■□□ 2.75
RIMBP3Q9UFD9 AL160237.2-201ENST00000556165 472 ntBASIC32.24■■■□□ 2.75
RIMBP3Q9UFD9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC32.24■■■□□ 2.75
RIMBP3Q9UFD9 AC117500.6-201ENST00000624871 588 ntBASIC32.24■■■□□ 2.75
RIMBP3Q9UFD9 AC087742.1-201ENST00000575880 1738 ntBASIC32.24■■■□□ 2.75
RIMBP3Q9UFD9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC32.24■■■□□ 2.75
RIMBP3Q9UFD9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC32.24■■■□□ 2.75
RIMBP3Q9UFD9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC32.23■■■□□ 2.75
RIMBP3Q9UFD9 SLC25A1P2-201ENST00000430693 912 ntBASIC32.23■■■□□ 2.75
RIMBP3Q9UFD9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
RIMBP3Q9UFD9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
RIMBP3Q9UFD9 AC092338.2-201ENST00000568827 1415 ntBASIC32.23■■■□□ 2.75
RIMBP3Q9UFD9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
RIMBP3Q9UFD9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RIMBP3Q9UFD9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
RIMBP3Q9UFD9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
RIMBP3Q9UFD9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC32.22■■■□□ 2.75
RIMBP3Q9UFD9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
RIMBP3Q9UFD9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC32.22■■■□□ 2.75
RIMBP3Q9UFD9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC32.22■■■□□ 2.75
RIMBP3Q9UFD9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC32.22■■■□□ 2.75
RIMBP3Q9UFD9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
RIMBP3Q9UFD9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC32.22■■■□□ 2.75
RIMBP3Q9UFD9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC32.22■■■□□ 2.75
RIMBP3Q9UFD9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
RIMBP3Q9UFD9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
RIMBP3Q9UFD9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC32.21■■■□□ 2.75
RIMBP3Q9UFD9 KRT18P1-202ENST00000452408 1331 ntBASIC32.21■■■□□ 2.75
RIMBP3Q9UFD9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
RIMBP3Q9UFD9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
RIMBP3Q9UFD9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
RIMBP3Q9UFD9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC32.21■■■□□ 2.75
RIMBP3Q9UFD9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC32.21■■■□□ 2.75
RIMBP3Q9UFD9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC32.21■■■□□ 2.75
RIMBP3Q9UFD9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC32.21■■■□□ 2.75
RIMBP3Q9UFD9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC32.2■■■□□ 2.75
RIMBP3Q9UFD9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
RIMBP3Q9UFD9 MIR3180-1-201ENST00000580374 94 ntBASIC32.2■■■□□ 2.75
RIMBP3Q9UFD9 MIR3180-3-201ENST00000584616 94 ntBASIC32.2■■■□□ 2.75
RIMBP3Q9UFD9 AP000692.2-201ENST00000608391 879 ntBASIC32.2■■■□□ 2.75
RIMBP3Q9UFD9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC32.2■■■□□ 2.75
RIMBP3Q9UFD9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
RIMBP3Q9UFD9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.74
RIMBP3Q9UFD9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
RIMBP3Q9UFD9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
RIMBP3Q9UFD9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
RIMBP3Q9UFD9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
RIMBP3Q9UFD9 TSPY12P-201ENST00000421279 868 ntBASIC32.19■■■□□ 2.74
RIMBP3Q9UFD9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
RIMBP3Q9UFD9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC32.19■■■□□ 2.74
RIMBP3Q9UFD9 AC092329.2-201ENST00000598402 547 ntBASIC32.19■■■□□ 2.74
RIMBP3Q9UFD9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
RIMBP3Q9UFD9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC32.19■■■□□ 2.74
RIMBP3Q9UFD9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC32.19■■■□□ 2.74
RIMBP3Q9UFD9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC32.19■■■□□ 2.74
RIMBP3Q9UFD9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
RIMBP3Q9UFD9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC32.18■■■□□ 2.74
RIMBP3Q9UFD9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC32.18■■■□□ 2.74
RIMBP3Q9UFD9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
RIMBP3Q9UFD9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC32.18■■■□□ 2.74
RIMBP3Q9UFD9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RIMBP3Q9UFD9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC32.18■■■□□ 2.74
RIMBP3Q9UFD9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RIMBP3Q9UFD9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RIMBP3Q9UFD9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RIMBP3Q9UFD9 AL732292.2-201ENST00000609649 430 ntBASIC32.18■■■□□ 2.74
RIMBP3Q9UFD9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RIMBP3Q9UFD9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RIMBP3Q9UFD9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC32.17■■■□□ 2.74
RIMBP3Q9UFD9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
RIMBP3Q9UFD9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC32.17■■■□□ 2.74
RIMBP3Q9UFD9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
RIMBP3Q9UFD9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
RIMBP3Q9UFD9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC32.17■■■□□ 2.74
RIMBP3Q9UFD9 PMS2P1-201ENST00000431037 1228 ntBASIC32.17■■■□□ 2.74
RIMBP3Q9UFD9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC32.17■■■□□ 2.74
RIMBP3Q9UFD9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC32.16■■■□□ 2.74
RIMBP3Q9UFD9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC32.16■■■□□ 2.74
RIMBP3Q9UFD9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC32.16■■■□□ 2.74
RIMBP3Q9UFD9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC32.16■■■□□ 2.74
RIMBP3Q9UFD9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC32.16■■■□□ 2.74
RIMBP3Q9UFD9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC32.16■■■□□ 2.74
RIMBP3Q9UFD9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC32.16■■■□□ 2.74
RIMBP3Q9UFD9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC32.16■■■□□ 2.74
RIMBP3Q9UFD9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC32.15■■■□□ 2.74
RIMBP3Q9UFD9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
RIMBP3Q9UFD9 RCC2P6-201ENST00000526625 1557 ntBASIC32.15■■■□□ 2.74
RIMBP3Q9UFD9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
RIMBP3Q9UFD9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC32.15■■■□□ 2.74
RIMBP3Q9UFD9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
RIMBP3Q9UFD9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
RIMBP3Q9UFD9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC32.15■■■□□ 2.74
RIMBP3Q9UFD9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
RIMBP3Q9UFD9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
RIMBP3Q9UFD9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC32.14■■■□□ 2.74
RIMBP3Q9UFD9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC32.14■■■□□ 2.74
RIMBP3Q9UFD9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC32.14■■■□□ 2.74
RIMBP3Q9UFD9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
RIMBP3Q9UFD9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC32.14■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms