Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NDE1Q9NXR1 AC008175.2-201ENST00000612840 297 ntBASIC19.35■□□□□ 0.69
NDE1Q9NXR1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NDE1Q9NXR1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
NDE1Q9NXR1 AC090340.1-201ENST00000620778 4980 ntBASIC19.35■□□□□ 0.69
NDE1Q9NXR1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NDE1Q9NXR1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
NDE1Q9NXR1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NDE1Q9NXR1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 Z82202.1-201ENST00000623446 1880 ntBASIC19.34■□□□□ 0.69
NDE1Q9NXR1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.34■□□□□ 0.69
NDE1Q9NXR1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.33■□□□□ 0.69
NDE1Q9NXR1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NDE1Q9NXR1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NDE1Q9NXR1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NDE1Q9NXR1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
NDE1Q9NXR1 AC007613.1-201ENST00000572811 2597 ntBASIC19.33■□□□□ 0.69
NDE1Q9NXR1 AC245052.3-201ENST00000450182 901 ntBASIC19.33■□□□□ 0.68
NDE1Q9NXR1 RARRES2P1-201ENST00000474487 481 ntBASIC19.33■□□□□ 0.68
NDE1Q9NXR1 IGHV3-19-201ENST00000521488 291 ntBASIC19.33■□□□□ 0.68
NDE1Q9NXR1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.33■□□□□ 0.68
NDE1Q9NXR1 TREX1-205ENST00000625293 1783 ntBASIC19.33■□□□□ 0.68
NDE1Q9NXR1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NDE1Q9NXR1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NDE1Q9NXR1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NDE1Q9NXR1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.33■□□□□ 0.68
NDE1Q9NXR1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NDE1Q9NXR1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 AL691432.2-201ENST00000607222 2038 ntBASIC19.32■□□□□ 0.68
NDE1Q9NXR1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.32■□□□□ 0.68
NDE1Q9NXR1 BX119927.1-201ENST00000636596 1552 ntBASIC19.32■□□□□ 0.68
NDE1Q9NXR1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.31■□□□□ 0.68
NDE1Q9NXR1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDE1Q9NXR1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NDE1Q9NXR1 AC116050.2-201ENST00000612102 1779 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms