Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 AC007322.3-201ENST00000426526 701 ntBASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 PGM5P4-201ENST00000421970 445 ntBASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 YBX1P1-201ENST00000445822 960 ntBASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 CDV3P1-201ENST00000471403 739 ntBASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 TERF1P2-201ENST00000583350 1212 ntBASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB16Q9NRJ7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 SLC7A5P2-201ENST00000553010 536 ntBASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 AC099778.1-201ENST00000568593 1911 ntBASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB16Q9NRJ7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB16Q9NRJ7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms