Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.35■■□□□ 1.33
EFCC1Q9HA90 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.35■■□□□ 1.33
EFCC1Q9HA90 AL031963.3-201ENST00000606441 850 ntBASIC23.35■■□□□ 1.33
EFCC1Q9HA90 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
EFCC1Q9HA90 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
EFCC1Q9HA90 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
EFCC1Q9HA90 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.35■■□□□ 1.33
EFCC1Q9HA90 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
EFCC1Q9HA90 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 AC073508.3-201ENST00000619697 1419 ntBASIC23.34■■□□□ 1.33
EFCC1Q9HA90 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.34■■□□□ 1.33
EFCC1Q9HA90 AC242852.2-201ENST00000615738 1807 ntBASIC23.34■■□□□ 1.33
EFCC1Q9HA90 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 NAPSB-206ENST00000562112 1266 ntBASIC23.34■■□□□ 1.33
EFCC1Q9HA90 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EFCC1Q9HA90 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 NUDT16P1-203ENST00000513809 620 ntBASIC23.33■■□□□ 1.33
EFCC1Q9HA90 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 REXO1L10P-201ENST00000615707 1290 ntBASIC23.33■■□□□ 1.33
EFCC1Q9HA90 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
EFCC1Q9HA90 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
EFCC1Q9HA90 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.33■■□□□ 1.32
EFCC1Q9HA90 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.32■■□□□ 1.32
EFCC1Q9HA90 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
EFCC1Q9HA90 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
EFCC1Q9HA90 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
EFCC1Q9HA90 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
EFCC1Q9HA90 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
EFCC1Q9HA90 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
EFCC1Q9HA90 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
EFCC1Q9HA90 AC104076.2-201ENST00000448912 469 ntBASIC23.32■■□□□ 1.32
EFCC1Q9HA90 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.32■■□□□ 1.32
EFCC1Q9HA90 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
EFCC1Q9HA90 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.32■■□□□ 1.32
EFCC1Q9HA90 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 USF2-205ENST00000594064 1179 ntTSL 2 BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
EFCC1Q9HA90 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
EFCC1Q9HA90 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
EFCC1Q9HA90 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
EFCC1Q9HA90 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
EFCC1Q9HA90 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
EFCC1Q9HA90 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
EFCC1Q9HA90 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
EFCC1Q9HA90 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms