Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VRTNQ9H8Y1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VRTNQ9H8Y1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VRTNQ9H8Y1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.36■■□□□ 1.01
VRTNQ9H8Y1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VRTNQ9H8Y1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
VRTNQ9H8Y1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.36■■□□□ 1.01
VRTNQ9H8Y1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 ABHD17AP1-201ENST00000358206 933 ntBASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 RPS2P52-201ENST00000469610 820 ntBASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VRTNQ9H8Y1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VRTNQ9H8Y1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
VRTNQ9H8Y1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.33■■□□□ 1.01
VRTNQ9H8Y1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.33■■□□□ 1.01
VRTNQ9H8Y1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
VRTNQ9H8Y1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VRTNQ9H8Y1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
VRTNQ9H8Y1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.33■■□□□ 1.01
VRTNQ9H8Y1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VRTNQ9H8Y1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.33■■□□□ 1.01
VRTNQ9H8Y1 KRT17P3-201ENST00000420566 1262 ntBASIC21.33■■□□□ 1.01
VRTNQ9H8Y1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.33■■□□□ 1.01
VRTNQ9H8Y1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.33■■□□□ 1.01
VRTNQ9H8Y1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.33■■□□□ 1.01
VRTNQ9H8Y1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
VRTNQ9H8Y1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.33■■□□□ 1.01
VRTNQ9H8Y1 ITM2C-210ENST00000620962 501 ntBASIC21.33■■□□□ 1.01
VRTNQ9H8Y1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VRTNQ9H8Y1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.33■■□□□ 1
VRTNQ9H8Y1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.33■■□□□ 1
VRTNQ9H8Y1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VRTNQ9H8Y1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VRTNQ9H8Y1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
VRTNQ9H8Y1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.32■■□□□ 1
VRTNQ9H8Y1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.32■■□□□ 1
VRTNQ9H8Y1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VRTNQ9H8Y1 FAM201B-201ENST00000458407 597 ntBASIC21.32■■□□□ 1
VRTNQ9H8Y1 AC069544.1-201ENST00000609399 999 ntBASIC21.32■■□□□ 1
VRTNQ9H8Y1 AL121829.2-201ENST00000620908 328 ntBASIC21.32■■□□□ 1
VRTNQ9H8Y1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.32■■□□□ 1
VRTNQ9H8Y1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.32■■□□□ 1
VRTNQ9H8Y1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.32■■□□□ 1
VRTNQ9H8Y1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VRTNQ9H8Y1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.32■■□□□ 1
VRTNQ9H8Y1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.32■■□□□ 1
VRTNQ9H8Y1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VRTNQ9H8Y1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.31■■□□□ 1
VRTNQ9H8Y1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
VRTNQ9H8Y1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
VRTNQ9H8Y1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
VRTNQ9H8Y1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.31■■□□□ 1
VRTNQ9H8Y1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.31■■□□□ 1
VRTNQ9H8Y1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VRTNQ9H8Y1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms