Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP28Q9H239 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MMP28Q9H239 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
MMP28Q9H239 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP28Q9H239 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP28Q9H239 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
MMP28Q9H239 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP28Q9H239 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP28Q9H239 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP28Q9H239 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.6■□□□□ 0.41
MMP28Q9H239 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP28Q9H239 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP28Q9H239 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP28Q9H239 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP28Q9H239 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.6■□□□□ 0.41
MMP28Q9H239 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP28Q9H239 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP28Q9H239 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.6■□□□□ 0.41
MMP28Q9H239 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP28Q9H239 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.6■□□□□ 0.41
MMP28Q9H239 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP28Q9H239 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP28Q9H239 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.6■□□□□ 0.41
MMP28Q9H239 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.6■□□□□ 0.41
MMP28Q9H239 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP28Q9H239 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
MMP28Q9H239 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MMP28Q9H239 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MMP28Q9H239 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP28Q9H239 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
MMP28Q9H239 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
MMP28Q9H239 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.59■□□□□ 0.41
MMP28Q9H239 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MMP28Q9H239 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
MMP28Q9H239 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MMP28Q9H239 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.59■□□□□ 0.41
MMP28Q9H239 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.59■□□□□ 0.41
MMP28Q9H239 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP28Q9H239 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.59■□□□□ 0.41
MMP28Q9H239 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP28Q9H239 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP28Q9H239 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP28Q9H239 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
MMP28Q9H239 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP28Q9H239 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
MMP28Q9H239 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP28Q9H239 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP28Q9H239 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MMP28Q9H239 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP28Q9H239 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP28Q9H239 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP28Q9H239 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP28Q9H239 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.58■□□□□ 0.4
MMP28Q9H239 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.58■□□□□ 0.4
MMP28Q9H239 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
MMP28Q9H239 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP28Q9H239 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
MMP28Q9H239 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP28Q9H239 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP28Q9H239 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.58■□□□□ 0.4
MMP28Q9H239 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
MMP28Q9H239 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
MMP28Q9H239 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
MMP28Q9H239 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP28Q9H239 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP28Q9H239 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.57■□□□□ 0.4
MMP28Q9H239 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP28Q9H239 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP28Q9H239 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
MMP28Q9H239 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.57■□□□□ 0.4
MMP28Q9H239 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP28Q9H239 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.57■□□□□ 0.4
MMP28Q9H239 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP28Q9H239 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP28Q9H239 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP28Q9H239 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP28Q9H239 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP28Q9H239 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP28Q9H239 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP28Q9H239 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP28Q9H239 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms