Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX47Q9H0S4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDX47Q9H0S4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.83■□□□□ 0.93
DDX47Q9H0S4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.83■□□□□ 0.93
DDX47Q9H0S4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX47Q9H0S4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
DDX47Q9H0S4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX47Q9H0S4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX47Q9H0S4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.83■□□□□ 0.93
DDX47Q9H0S4 AC142381.2-201ENST00000566120 298 ntBASIC20.83■□□□□ 0.93
DDX47Q9H0S4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
DDX47Q9H0S4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
DDX47Q9H0S4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
DDX47Q9H0S4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.83■□□□□ 0.92
DDX47Q9H0S4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX47Q9H0S4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX47Q9H0S4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.83■□□□□ 0.92
DDX47Q9H0S4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.83■□□□□ 0.92
DDX47Q9H0S4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
DDX47Q9H0S4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.82■□□□□ 0.92
DDX47Q9H0S4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
DDX47Q9H0S4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
DDX47Q9H0S4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
DDX47Q9H0S4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.79■□□□□ 0.92
DDX47Q9H0S4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.79■□□□□ 0.92
DDX47Q9H0S4 AC019069.1-201ENST00000610008 1333 ntBASIC20.79■□□□□ 0.92
DDX47Q9H0S4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX47Q9H0S4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
DDX47Q9H0S4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX47Q9H0S4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX47Q9H0S4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX47Q9H0S4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX47Q9H0S4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.79■□□□□ 0.92
DDX47Q9H0S4 AL139246.5-201ENST00000606645 996 ntBASIC20.79■□□□□ 0.92
DDX47Q9H0S4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms