Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.65■□□□□ 0.42
COMMD4Q9H0A8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
COMMD4Q9H0A8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
COMMD4Q9H0A8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
COMMD4Q9H0A8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
COMMD4Q9H0A8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
COMMD4Q9H0A8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COMMD4Q9H0A8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COMMD4Q9H0A8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
COMMD4Q9H0A8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 AL691432.2-201ENST00000607222 2038 ntBASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 MIR638-201ENST00000385237 100 ntBASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 PGM5P4-201ENST00000421970 445 ntBASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 CDV3P1-201ENST00000471403 739 ntBASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
COMMD4Q9H0A8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 BCL2-203ENST00000589955 5011 ntBASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD4Q9H0A8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 RBM17P2-201ENST00000616397 1405 ntBASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD4Q9H0A8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.61■□□□□ 0.41
COMMD4Q9H0A8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD4Q9H0A8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
COMMD4Q9H0A8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
COMMD4Q9H0A8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms