Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.33□□□□□ -0.28
LITAFQ99732 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LITAFQ99732 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LITAFQ99732 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LITAFQ99732 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.33□□□□□ -0.28
LITAFQ99732 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LITAFQ99732 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LITAFQ99732 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LITAFQ99732 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LITAFQ99732 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LITAFQ99732 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC13.33□□□□□ -0.28
LITAFQ99732 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC13.33□□□□□ -0.28
LITAFQ99732 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC13.33□□□□□ -0.28
LITAFQ99732 HSD17B1P1-201ENST00000590052 955 ntBASIC13.33□□□□□ -0.28
LITAFQ99732 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC13.33□□□□□ -0.28
LITAFQ99732 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.33□□□□□ -0.28
LITAFQ99732 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LITAFQ99732 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LITAFQ99732 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LITAFQ99732 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.33□□□□□ -0.28
LITAFQ99732 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LITAFQ99732 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LITAFQ99732 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LITAFQ99732 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LITAFQ99732 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LITAFQ99732 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
LITAFQ99732 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LITAFQ99732 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LITAFQ99732 NOC2LP2-201ENST00000407594 1944 ntBASIC13.33□□□□□ -0.28
LITAFQ99732 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LITAFQ99732 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LITAFQ99732 AC009237.14-201ENST00000609975 1594 ntBASIC13.32□□□□□ -0.28
LITAFQ99732 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LITAFQ99732 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.32□□□□□ -0.28
LITAFQ99732 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
LITAFQ99732 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.32□□□□□ -0.28
LITAFQ99732 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.32□□□□□ -0.28
LITAFQ99732 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LITAFQ99732 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LITAFQ99732 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.32□□□□□ -0.28
LITAFQ99732 SLC47A1P1-202ENST00000449666 945 ntBASIC13.32□□□□□ -0.28
LITAFQ99732 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC13.32□□□□□ -0.28
LITAFQ99732 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.32□□□□□ -0.28
LITAFQ99732 MIR4787-201ENST00000607364 84 ntBASIC13.32□□□□□ -0.28
LITAFQ99732 BRD4-212ENST00000630599 726 ntTSL 2 BASIC13.32□□□□□ -0.28
LITAFQ99732 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC13.32□□□□□ -0.28
LITAFQ99732 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.32□□□□□ -0.28
LITAFQ99732 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.32□□□□□ -0.28
LITAFQ99732 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.32□□□□□ -0.28
LITAFQ99732 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC13.32□□□□□ -0.28
LITAFQ99732 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LITAFQ99732 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.32□□□□□ -0.28
LITAFQ99732 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LITAFQ99732 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
LITAFQ99732 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LITAFQ99732 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.31□□□□□ -0.28
LITAFQ99732 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LITAFQ99732 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LITAFQ99732 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LITAFQ99732 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.31□□□□□ -0.28
LITAFQ99732 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
LITAFQ99732 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LITAFQ99732 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
LITAFQ99732 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LITAFQ99732 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC13.31□□□□□ -0.28
LITAFQ99732 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC13.31□□□□□ -0.28
LITAFQ99732 RNF146-205ENST00000477776 762 ntTSL 3 BASIC13.31□□□□□ -0.28
LITAFQ99732 MIR6724-1-201ENST00000616420 92 ntBASIC13.31□□□□□ -0.28
LITAFQ99732 MIR6724-2-201ENST00000616483 92 ntBASIC13.31□□□□□ -0.28
LITAFQ99732 MIR6724-4-201ENST00000617390 92 ntBASIC13.31□□□□□ -0.28
LITAFQ99732 MIR6724-3-201ENST00000622482 92 ntBASIC13.31□□□□□ -0.28
LITAFQ99732 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LITAFQ99732 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LITAFQ99732 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LITAFQ99732 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LITAFQ99732 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LITAFQ99732 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC13.31□□□□□ -0.28
LITAFQ99732 NOC2LP1-202ENST00000452600 2235 ntBASIC13.31□□□□□ -0.28
LITAFQ99732 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LITAFQ99732 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.31□□□□□ -0.28
LITAFQ99732 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LITAFQ99732 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.3□□□□□ -0.28
LITAFQ99732 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms