Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
COL12A1Q99715 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COL12A1Q99715 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL12A1Q99715 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL12A1Q99715 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.63■□□□□ 0.41
COL12A1Q99715 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL12A1Q99715 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.63■□□□□ 0.41
COL12A1Q99715 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.63■□□□□ 0.41
COL12A1Q99715 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL12A1Q99715 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
COL12A1Q99715 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.62■□□□□ 0.41
COL12A1Q99715 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.62■□□□□ 0.41
COL12A1Q99715 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.62■□□□□ 0.41
COL12A1Q99715 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.62■□□□□ 0.41
COL12A1Q99715 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.62■□□□□ 0.41
COL12A1Q99715 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL12A1Q99715 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL12A1Q99715 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.62■□□□□ 0.41
COL12A1Q99715 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL12A1Q99715 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL12A1Q99715 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL12A1Q99715 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.62■□□□□ 0.41
COL12A1Q99715 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
COL12A1Q99715 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.62■□□□□ 0.41
COL12A1Q99715 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.62■□□□□ 0.41
COL12A1Q99715 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
COL12A1Q99715 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL12A1Q99715 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.61■□□□□ 0.41
COL12A1Q99715 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL12A1Q99715 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.61■□□□□ 0.41
COL12A1Q99715 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL12A1Q99715 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL12A1Q99715 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL12A1Q99715 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL12A1Q99715 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL12A1Q99715 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL12A1Q99715 LINC02084-201ENST00000606069 1096 ntBASIC17.61■□□□□ 0.41
COL12A1Q99715 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.61■□□□□ 0.41
COL12A1Q99715 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL12A1Q99715 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL12A1Q99715 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL12A1Q99715 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
COL12A1Q99715 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL12A1Q99715 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.61■□□□□ 0.41
COL12A1Q99715 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.61■□□□□ 0.41
COL12A1Q99715 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.61■□□□□ 0.41
COL12A1Q99715 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.61■□□□□ 0.41
COL12A1Q99715 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL12A1Q99715 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.61■□□□□ 0.41
COL12A1Q99715 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
COL12A1Q99715 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.61■□□□□ 0.41
COL12A1Q99715 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.61■□□□□ 0.41
COL12A1Q99715 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL12A1Q99715 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL12A1Q99715 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL12A1Q99715 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL12A1Q99715 AC092183.1-201ENST00000469884 875 ntBASIC17.6■□□□□ 0.41
COL12A1Q99715 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.6■□□□□ 0.41
COL12A1Q99715 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.6■□□□□ 0.41
COL12A1Q99715 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL12A1Q99715 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL12A1Q99715 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
COL12A1Q99715 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL12A1Q99715 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL12A1Q99715 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL12A1Q99715 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL12A1Q99715 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL12A1Q99715 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL12A1Q99715 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.6■□□□□ 0.41
COL12A1Q99715 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.6■□□□□ 0.41
COL12A1Q99715 COX11P1-201ENST00000489116 835 ntBASIC17.6■□□□□ 0.41
COL12A1Q99715 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.6■□□□□ 0.41
COL12A1Q99715 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
COL12A1Q99715 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL12A1Q99715 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
COL12A1Q99715 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL12A1Q99715 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL12A1Q99715 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.59■□□□□ 0.41
COL12A1Q99715 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.59■□□□□ 0.41
COL12A1Q99715 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.59■□□□□ 0.41
COL12A1Q99715 B3GAT3P1-201ENST00000471720 806 ntBASIC17.59■□□□□ 0.41
COL12A1Q99715 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.59■□□□□ 0.41
COL12A1Q99715 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
COL12A1Q99715 AC097488.1-201ENST00000507834 756 ntBASIC17.59■□□□□ 0.41
COL12A1Q99715 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COL12A1Q99715 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL12A1Q99715 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL12A1Q99715 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL12A1Q99715 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL12A1Q99715 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL12A1Q99715 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.59■□□□□ 0.41
COL12A1Q99715 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL12A1Q99715 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL12A1Q99715 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.59■□□□□ 0.41
COL12A1Q99715 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.59■□□□□ 0.41
COL12A1Q99715 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.59■□□□□ 0.41
COL12A1Q99715 UNC93B7-201ENST00000509439 705 ntBASIC17.59■□□□□ 0.41
COL12A1Q99715 VENTXP5-201ENST00000523979 775 ntBASIC17.59■□□□□ 0.41
COL12A1Q99715 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.59■□□□□ 0.41
COL12A1Q99715 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms