Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSTQ99698 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.96□□□□□ -0.17
LYSTQ99698 HCG4P8-203ENST00000443049 980 ntBASIC13.96□□□□□ -0.17
LYSTQ99698 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.96□□□□□ -0.17
LYSTQ99698 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LYSTQ99698 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSTQ99698 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSTQ99698 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LYSTQ99698 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSTQ99698 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSTQ99698 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LYSTQ99698 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.96□□□□□ -0.18
LYSTQ99698 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LYSTQ99698 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC13.96□□□□□ -0.18
LYSTQ99698 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.96□□□□□ -0.18
LYSTQ99698 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC13.96□□□□□ -0.18
LYSTQ99698 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LYSTQ99698 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LYSTQ99698 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.96□□□□□ -0.18
LYSTQ99698 KRT8P10-201ENST00000450021 1447 ntBASIC13.95□□□□□ -0.18
LYSTQ99698 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSTQ99698 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSTQ99698 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSTQ99698 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSTQ99698 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.95□□□□□ -0.18
LYSTQ99698 ATP5G1P1-201ENST00000448724 379 ntBASIC13.95□□□□□ -0.18
LYSTQ99698 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSTQ99698 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSTQ99698 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSTQ99698 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC13.95□□□□□ -0.18
LYSTQ99698 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSTQ99698 TSPY14P-201ENST00000303979 915 ntBASIC13.95□□□□□ -0.18
LYSTQ99698 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSTQ99698 AC117947.1-201ENST00000427448 529 ntBASIC13.95□□□□□ -0.18
LYSTQ99698 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSTQ99698 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.95□□□□□ -0.18
LYSTQ99698 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSTQ99698 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.95□□□□□ -0.18
LYSTQ99698 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSTQ99698 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LYSTQ99698 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.95□□□□□ -0.18
LYSTQ99698 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSTQ99698 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSTQ99698 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSTQ99698 FAM87A-204ENST00000613235 858 ntBASIC13.95□□□□□ -0.18
LYSTQ99698 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.95□□□□□ -0.18
LYSTQ99698 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
LYSTQ99698 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSTQ99698 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSTQ99698 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSTQ99698 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSTQ99698 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSTQ99698 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSTQ99698 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSTQ99698 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC13.94□□□□□ -0.18
LYSTQ99698 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.94□□□□□ -0.18
LYSTQ99698 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.94□□□□□ -0.18
LYSTQ99698 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.94□□□□□ -0.18
LYSTQ99698 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.94□□□□□ -0.18
LYSTQ99698 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSTQ99698 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSTQ99698 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSTQ99698 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSTQ99698 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSTQ99698 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LYSTQ99698 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSTQ99698 AC063952.2-201ENST00000498792 1227 ntBASIC13.94□□□□□ -0.18
LYSTQ99698 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.94□□□□□ -0.18
LYSTQ99698 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSTQ99698 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.94□□□□□ -0.18
LYSTQ99698 AC026271.3-201ENST00000571884 352 ntBASIC13.94□□□□□ -0.18
LYSTQ99698 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSTQ99698 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSTQ99698 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSTQ99698 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSTQ99698 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LYSTQ99698 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSTQ99698 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.93□□□□□ -0.18
LYSTQ99698 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LYSTQ99698 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LYSTQ99698 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.93□□□□□ -0.18
LYSTQ99698 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.93□□□□□ -0.18
LYSTQ99698 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSTQ99698 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.93□□□□□ -0.18
LYSTQ99698 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSTQ99698 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSTQ99698 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSTQ99698 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSTQ99698 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSTQ99698 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.93□□□□□ -0.18
LYSTQ99698 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.93□□□□□ -0.18
LYSTQ99698 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.93□□□□□ -0.18
LYSTQ99698 AC004264.1-201ENST00000608354 794 ntBASIC13.93□□□□□ -0.18
LYSTQ99698 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSTQ99698 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSTQ99698 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSTQ99698 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSTQ99698 SLC25A1P4-201ENST00000567977 778 ntBASIC13.93□□□□□ -0.18
LYSTQ99698 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSTQ99698 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms