Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHCQ99643 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.29■□□□□ 0.36
SDHCQ99643 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHCQ99643 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHCQ99643 AC139713.2-201ENST00000641328 2723 ntBASIC17.29■□□□□ 0.36
SDHCQ99643 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHCQ99643 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.29■□□□□ 0.36
SDHCQ99643 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SDHCQ99643 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHCQ99643 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SDHCQ99643 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDHCQ99643 AC120498.9-201ENST00000339021 3867 ntBASIC17.28■□□□□ 0.36
SDHCQ99643 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.28■□□□□ 0.36
SDHCQ99643 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDHCQ99643 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDHCQ99643 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.28■□□□□ 0.36
SDHCQ99643 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.28■□□□□ 0.36
SDHCQ99643 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.28■□□□□ 0.36
SDHCQ99643 AC006333.2-201ENST00000607957 2099 ntBASIC17.28■□□□□ 0.36
SDHCQ99643 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SDHCQ99643 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDHCQ99643 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.28■□□□□ 0.36
SDHCQ99643 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.28■□□□□ 0.36
SDHCQ99643 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SDHCQ99643 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDHCQ99643 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDHCQ99643 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SDHCQ99643 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SDHCQ99643 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SDHCQ99643 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SDHCQ99643 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SDHCQ99643 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SDHCQ99643 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SDHCQ99643 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SDHCQ99643 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SDHCQ99643 AC004987.1-201ENST00000428627 508 ntBASIC17.27■□□□□ 0.36
SDHCQ99643 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.27■□□□□ 0.36
SDHCQ99643 AC099791.2-201ENST00000605725 427 ntBASIC17.27■□□□□ 0.36
SDHCQ99643 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SDHCQ99643 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.27■□□□□ 0.36
SDHCQ99643 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.27■□□□□ 0.36
SDHCQ99643 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SDHCQ99643 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SDHCQ99643 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SDHCQ99643 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.27■□□□□ 0.36
SDHCQ99643 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SDHCQ99643 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SDHCQ99643 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SDHCQ99643 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.27■□□□□ 0.35
SDHCQ99643 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SDHCQ99643 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SDHCQ99643 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.35
SDHCQ99643 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.27■□□□□ 0.35
SDHCQ99643 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SDHCQ99643 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.27■□□□□ 0.35
SDHCQ99643 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SDHCQ99643 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.27■□□□□ 0.35
SDHCQ99643 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
SDHCQ99643 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHCQ99643 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.26■□□□□ 0.35
SDHCQ99643 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SDHCQ99643 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHCQ99643 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SDHCQ99643 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHCQ99643 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHCQ99643 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHCQ99643 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SDHCQ99643 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHCQ99643 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHCQ99643 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.26■□□□□ 0.35
SDHCQ99643 SMUG1P1-201ENST00000590640 811 ntBASIC17.26■□□□□ 0.35
SDHCQ99643 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.26■□□□□ 0.35
SDHCQ99643 MTDHP2-201ENST00000601468 714 ntBASIC17.26■□□□□ 0.35
SDHCQ99643 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDHCQ99643 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SDHCQ99643 WIZP1-201ENST00000531444 2299 ntBASIC17.26■□□□□ 0.35
SDHCQ99643 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SDHCQ99643 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SDHCQ99643 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SDHCQ99643 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHCQ99643 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.25■□□□□ 0.35
SDHCQ99643 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.25■□□□□ 0.35
SDHCQ99643 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.25■□□□□ 0.35
SDHCQ99643 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
SDHCQ99643 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHCQ99643 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.25■□□□□ 0.35
SDHCQ99643 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.25■□□□□ 0.35
SDHCQ99643 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHCQ99643 ATP5G2P3-201ENST00000429083 425 ntBASIC17.25■□□□□ 0.35
SDHCQ99643 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.25■□□□□ 0.35
SDHCQ99643 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SDHCQ99643 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.25■□□□□ 0.35
SDHCQ99643 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SDHCQ99643 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHCQ99643 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHCQ99643 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SDHCQ99643 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.25■□□□□ 0.35
SDHCQ99643 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.25■□□□□ 0.35
SDHCQ99643 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHCQ99643 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms