Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAB40CQ96S21 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAB40CQ96S21 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAB40CQ96S21 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RAB40CQ96S21 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
RAB40CQ96S21 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 KRT8P36-201ENST00000489121 1440 ntBASIC16.2■□□□□ 0.18
RAB40CQ96S21 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB40CQ96S21 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.2■□□□□ 0.18
RAB40CQ96S21 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB40CQ96S21 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.2■□□□□ 0.18
RAB40CQ96S21 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.2■□□□□ 0.18
RAB40CQ96S21 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB40CQ96S21 AL139246.5-201ENST00000606645 996 ntBASIC16.2■□□□□ 0.18
RAB40CQ96S21 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 AC090340.1-201ENST00000620778 4980 ntBASIC16.2■□□□□ 0.18
RAB40CQ96S21 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB40CQ96S21 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB40CQ96S21 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RAB40CQ96S21 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RAB40CQ96S21 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB40CQ96S21 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40CQ96S21 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40CQ96S21 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40CQ96S21 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAB40CQ96S21 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40CQ96S21 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40CQ96S21 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40CQ96S21 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40CQ96S21 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40CQ96S21 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RAB40CQ96S21 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40CQ96S21 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40CQ96S21 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB40CQ96S21 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB40CQ96S21 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40CQ96S21 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40CQ96S21 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB40CQ96S21 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAB40CQ96S21 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAB40CQ96S21 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB40CQ96S21 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
RAB40CQ96S21 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAB40CQ96S21 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RAB40CQ96S21 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RAB40CQ96S21 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
RAB40CQ96S21 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40CQ96S21 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40CQ96S21 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40CQ96S21 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB40CQ96S21 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40CQ96S21 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAB40CQ96S21 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40CQ96S21 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB40CQ96S21 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40CQ96S21 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB40CQ96S21 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB40CQ96S21 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40CQ96S21 EDA-201ENST00000338901 1233 ntBASIC16.18■□□□□ 0.18
RAB40CQ96S21 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB40CQ96S21 AC008764.7-201ENST00000593779 1081 ntBASIC16.18■□□□□ 0.18
RAB40CQ96S21 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40CQ96S21 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.18■□□□□ 0.18
RAB40CQ96S21 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB40CQ96S21 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.18■□□□□ 0.18
RAB40CQ96S21 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40CQ96S21 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40CQ96S21 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40CQ96S21 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40CQ96S21 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40CQ96S21 TSPY26P-201ENST00000476365 1326 ntBASIC16.18■□□□□ 0.18
RAB40CQ96S21 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB40CQ96S21 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40CQ96S21 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RAB40CQ96S21 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB40CQ96S21 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RAB40CQ96S21 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAB40CQ96S21 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB40CQ96S21 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40CQ96S21 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40CQ96S21 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40CQ96S21 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40CQ96S21 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms