Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
AP1S3Q96PC3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 SERBP1P1-201ENST00000396021 1160 ntBASIC15.09■□□□□ 0.01
AP1S3Q96PC3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.09■□□□□ 0.01
AP1S3Q96PC3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.09■□□□□ 0.01
AP1S3Q96PC3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
AP1S3Q96PC3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP1S3Q96PC3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP1S3Q96PC3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.08■□□□□ 0.01
AP1S3Q96PC3 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.08■□□□□ 0.01
AP1S3Q96PC3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
AP1S3Q96PC3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.08■□□□□ 0
AP1S3Q96PC3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP1S3Q96PC3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
AP1S3Q96PC3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.08■□□□□ 0
AP1S3Q96PC3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.08■□□□□ 0
AP1S3Q96PC3 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.08■□□□□ 0
AP1S3Q96PC3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.08■□□□□ 0
AP1S3Q96PC3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP1S3Q96PC3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
AP1S3Q96PC3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
AP1S3Q96PC3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP1S3Q96PC3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP1S3Q96PC3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
AP1S3Q96PC3 BX323043.1-201ENST00000641006 1765 ntBASIC15.08■□□□□ 0
AP1S3Q96PC3 AC007225.1-201ENST00000566331 1836 ntBASIC15.08■□□□□ 0
AP1S3Q96PC3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
AP1S3Q96PC3 AC020907.5-201ENST00000624372 1936 ntBASIC15.07■□□□□ 0
AP1S3Q96PC3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.07■□□□□ 0
AP1S3Q96PC3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
AP1S3Q96PC3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
AP1S3Q96PC3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP1S3Q96PC3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP1S3Q96PC3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP1S3Q96PC3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP1S3Q96PC3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
AP1S3Q96PC3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP1S3Q96PC3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
AP1S3Q96PC3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP1S3Q96PC3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP1S3Q96PC3 AC027702.1-201ENST00000563810 1770 ntBASIC15.07■□□□□ 0
AP1S3Q96PC3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
AP1S3Q96PC3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
AP1S3Q96PC3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
AP1S3Q96PC3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.07■□□□□ 0
AP1S3Q96PC3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.07■□□□□ 0
AP1S3Q96PC3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.07■□□□□ 0
AP1S3Q96PC3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP1S3Q96PC3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
AP1S3Q96PC3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP1S3Q96PC3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
AP1S3Q96PC3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.07■□□□□ 0
AP1S3Q96PC3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.07■□□□□ 0
AP1S3Q96PC3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP1S3Q96PC3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.07■□□□□ 0
AP1S3Q96PC3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
AP1S3Q96PC3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
AP1S3Q96PC3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
AP1S3Q96PC3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.06■□□□□ 0
AP1S3Q96PC3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.06■□□□□ 0
AP1S3Q96PC3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.06■□□□□ 0
AP1S3Q96PC3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP1S3Q96PC3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms