Protein–RNA interactions for Protein: Q96NL0

RUNDC3B, RUN domain-containing protein 3B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3BQ96NL0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RUNDC3BQ96NL0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RUNDC3BQ96NL0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RUNDC3BQ96NL0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RUNDC3BQ96NL0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RUNDC3BQ96NL0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.72■□□□□ 0.91
RUNDC3BQ96NL0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RUNDC3BQ96NL0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RUNDC3BQ96NL0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RUNDC3BQ96NL0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 TNXA-203ENST00000507684 2038 ntBASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 TERF1P2-201ENST00000583350 1212 ntBASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 Z82202.1-201ENST00000623446 1880 ntBASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 AP000974.1-201ENST00000623909 2387 ntBASIC20.71■□□□□ 0.91
RUNDC3BQ96NL0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RUNDC3BQ96NL0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RUNDC3BQ96NL0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RUNDC3BQ96NL0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RUNDC3BQ96NL0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RUNDC3BQ96NL0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RUNDC3BQ96NL0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.68■□□□□ 0.9
RUNDC3BQ96NL0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.68■□□□□ 0.9
RUNDC3BQ96NL0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.68■□□□□ 0.9
RUNDC3BQ96NL0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
RUNDC3BQ96NL0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RUNDC3BQ96NL0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
RUNDC3BQ96NL0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RUNDC3BQ96NL0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RUNDC3BQ96NL0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
RUNDC3BQ96NL0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms