Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ITCHQ96J02 AC087633.2-202ENST00000565166 1439 ntBASIC19.05■□□□□ 0.64
ITCHQ96J02 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ITCHQ96J02 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ITCHQ96J02 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ITCHQ96J02 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ITCHQ96J02 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ITCHQ96J02 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.05■□□□□ 0.64
ITCHQ96J02 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.04■□□□□ 0.64
ITCHQ96J02 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.04■□□□□ 0.64
ITCHQ96J02 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.04■□□□□ 0.64
ITCHQ96J02 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ITCHQ96J02 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ITCHQ96J02 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ITCHQ96J02 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
ITCHQ96J02 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ITCHQ96J02 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ITCHQ96J02 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ITCHQ96J02 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ITCHQ96J02 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.04■□□□□ 0.64
ITCHQ96J02 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ITCHQ96J02 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.04■□□□□ 0.64
ITCHQ96J02 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.04■□□□□ 0.64
ITCHQ96J02 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ITCHQ96J02 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.04■□□□□ 0.64
ITCHQ96J02 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.04■□□□□ 0.64
ITCHQ96J02 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ITCHQ96J02 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
ITCHQ96J02 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.04■□□□□ 0.64
ITCHQ96J02 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ITCHQ96J02 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ITCHQ96J02 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
ITCHQ96J02 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ITCHQ96J02 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ITCHQ96J02 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ITCHQ96J02 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ITCHQ96J02 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ITCHQ96J02 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
ITCHQ96J02 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ITCHQ96J02 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ITCHQ96J02 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ITCHQ96J02 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ITCHQ96J02 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
ITCHQ96J02 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.03■□□□□ 0.64
ITCHQ96J02 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ITCHQ96J02 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.03■□□□□ 0.64
ITCHQ96J02 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ITCHQ96J02 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ITCHQ96J02 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
ITCHQ96J02 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ITCHQ96J02 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.03■□□□□ 0.64
ITCHQ96J02 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
ITCHQ96J02 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ITCHQ96J02 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.03■□□□□ 0.64
ITCHQ96J02 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.03■□□□□ 0.64
ITCHQ96J02 MYCNOS-205ENST00000641950 531 ntBASIC19.03■□□□□ 0.64
ITCHQ96J02 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ITCHQ96J02 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
ITCHQ96J02 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.03■□□□□ 0.64
ITCHQ96J02 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ITCHQ96J02 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.03■□□□□ 0.64
ITCHQ96J02 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ITCHQ96J02 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ITCHQ96J02 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ITCHQ96J02 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ITCHQ96J02 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ITCHQ96J02 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ITCHQ96J02 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ITCHQ96J02 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ITCHQ96J02 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.02■□□□□ 0.64
ITCHQ96J02 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ITCHQ96J02 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ITCHQ96J02 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ITCHQ96J02 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.02■□□□□ 0.64
ITCHQ96J02 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ITCHQ96J02 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.02■□□□□ 0.64
ITCHQ96J02 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.02■□□□□ 0.64
ITCHQ96J02 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ITCHQ96J02 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.02■□□□□ 0.64
ITCHQ96J02 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ITCHQ96J02 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
ITCHQ96J02 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.02■□□□□ 0.64
ITCHQ96J02 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ITCHQ96J02 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ITCHQ96J02 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
ITCHQ96J02 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
ITCHQ96J02 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ITCHQ96J02 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ITCHQ96J02 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ITCHQ96J02 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.01■□□□□ 0.63
ITCHQ96J02 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.01■□□□□ 0.63
ITCHQ96J02 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ITCHQ96J02 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ITCHQ96J02 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ITCHQ96J02 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ITCHQ96J02 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
ITCHQ96J02 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ITCHQ96J02 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.01■□□□□ 0.63
ITCHQ96J02 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ITCHQ96J02 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms