Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
USP7Q93009 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.75■□□□□ 0.75
USP7Q93009 AL512408.1-201ENST00000569378 2000 ntBASIC19.75■□□□□ 0.75
USP7Q93009 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
USP7Q93009 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
USP7Q93009 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP7Q93009 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.75■□□□□ 0.75
USP7Q93009 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
USP7Q93009 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.75■□□□□ 0.75
USP7Q93009 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP7Q93009 AC060766.5-201ENST00000590539 871 ntBASIC19.75■□□□□ 0.75
USP7Q93009 AL589743.5-201ENST00000616611 1050 ntBASIC19.75■□□□□ 0.75
USP7Q93009 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP7Q93009 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.75■□□□□ 0.75
USP7Q93009 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP7Q93009 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
USP7Q93009 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP7Q93009 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP7Q93009 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.74■□□□□ 0.75
USP7Q93009 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP7Q93009 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP7Q93009 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.74■□□□□ 0.75
USP7Q93009 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP7Q93009 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.74■□□□□ 0.75
USP7Q93009 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP7Q93009 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
USP7Q93009 MCRIP2P1-201ENST00000394346 511 ntBASIC19.74■□□□□ 0.75
USP7Q93009 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.74■□□□□ 0.75
USP7Q93009 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP7Q93009 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP7Q93009 AC008403.3-201ENST00000598924 454 ntBASIC19.74■□□□□ 0.75
USP7Q93009 HLA-B-256ENST00000639848 1089 ntBASIC19.74■□□□□ 0.75
USP7Q93009 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP7Q93009 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP7Q93009 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP7Q93009 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP7Q93009 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP7Q93009 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP7Q93009 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
USP7Q93009 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.74■□□□□ 0.75
USP7Q93009 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
USP7Q93009 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP7Q93009 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
USP7Q93009 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP7Q93009 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP7Q93009 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP7Q93009 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
USP7Q93009 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP7Q93009 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.73■□□□□ 0.75
USP7Q93009 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.73■□□□□ 0.75
USP7Q93009 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.73■□□□□ 0.75
USP7Q93009 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.73■□□□□ 0.75
USP7Q93009 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.73■□□□□ 0.75
USP7Q93009 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
USP7Q93009 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
USP7Q93009 MIR2861-201ENST00000636310 90 ntBASIC19.73■□□□□ 0.75
USP7Q93009 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP7Q93009 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP7Q93009 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP7Q93009 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP7Q93009 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP7Q93009 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP7Q93009 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
USP7Q93009 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.72■□□□□ 0.75
USP7Q93009 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
USP7Q93009 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP7Q93009 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.72■□□□□ 0.75
USP7Q93009 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP7Q93009 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
USP7Q93009 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP7Q93009 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP7Q93009 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.72■□□□□ 0.75
USP7Q93009 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP7Q93009 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP7Q93009 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.72■□□□□ 0.75
USP7Q93009 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP7Q93009 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP7Q93009 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.72■□□□□ 0.75
USP7Q93009 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP7Q93009 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.72■□□□□ 0.75
USP7Q93009 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.72■□□□□ 0.75
USP7Q93009 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP7Q93009 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP7Q93009 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP7Q93009 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP7Q93009 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
USP7Q93009 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP7Q93009 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP7Q93009 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.71■□□□□ 0.75
USP7Q93009 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.71■□□□□ 0.75
USP7Q93009 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP7Q93009 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.71■□□□□ 0.75
USP7Q93009 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP7Q93009 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP7Q93009 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP7Q93009 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP7Q93009 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.71■□□□□ 0.75
USP7Q93009 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
USP7Q93009 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.71■□□□□ 0.75
USP7Q93009 KRT18P68-201ENST00000392293 1000 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms