Protein–RNA interactions for Protein: Q92973

TNPO1, Transportin-1, humanhuman

Known RBP Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1Q92973 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TNPO1Q92973 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TNPO1Q92973 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TNPO1Q92973 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TNPO1Q92973 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TNPO1Q92973 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TNPO1Q92973 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNPO1Q92973 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
TNPO1Q92973 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC23.77■■□□□ 1.4
TNPO1Q92973 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNPO1Q92973 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNPO1Q92973 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC23.77■■□□□ 1.4
TNPO1Q92973 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNPO1Q92973 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TNPO1Q92973 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TNPO1Q92973 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
TNPO1Q92973 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNPO1Q92973 AC010141.2-201ENST00000452426 721 ntBASIC23.77■■□□□ 1.4
TNPO1Q92973 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.77■■□□□ 1.4
TNPO1Q92973 AC053503.5-201ENST00000601508 636 ntBASIC23.77■■□□□ 1.4
TNPO1Q92973 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.77■■□□□ 1.4
TNPO1Q92973 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.77■■□□□ 1.4
TNPO1Q92973 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNPO1Q92973 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNPO1Q92973 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNPO1Q92973 AL691432.2-201ENST00000607222 2038 ntBASIC23.77■■□□□ 1.4
TNPO1Q92973 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNPO1Q92973 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TNPO1Q92973 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TNPO1Q92973 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.39
TNPO1Q92973 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNPO1Q92973 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TNPO1Q92973 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.76■■□□□ 1.39
TNPO1Q92973 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TNPO1Q92973 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.76■■□□□ 1.39
TNPO1Q92973 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TNPO1Q92973 AC093484.2-201ENST00000580996 2166 ntBASIC23.76■■□□□ 1.39
TNPO1Q92973 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.76■■□□□ 1.39
TNPO1Q92973 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TNPO1Q92973 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC23.76■■□□□ 1.39
TNPO1Q92973 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNPO1Q92973 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TNPO1Q92973 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNPO1Q92973 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.75■■□□□ 1.39
TNPO1Q92973 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNPO1Q92973 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.75■■□□□ 1.39
TNPO1Q92973 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNPO1Q92973 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNPO1Q92973 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNPO1Q92973 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.75■■□□□ 1.39
TNPO1Q92973 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.75■■□□□ 1.39
TNPO1Q92973 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.75■■□□□ 1.39
TNPO1Q92973 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNPO1Q92973 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNPO1Q92973 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
TNPO1Q92973 HLA-L-209ENST00000420110 1011 ntBASIC23.75■■□□□ 1.39
TNPO1Q92973 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TNPO1Q92973 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.75■■□□□ 1.39
TNPO1Q92973 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TNPO1Q92973 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.75■■□□□ 1.39
TNPO1Q92973 MFSD11-216ENST00000590393 1141 ntBASIC23.75■■□□□ 1.39
TNPO1Q92973 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.75■■□□□ 1.39
TNPO1Q92973 MYCNOS-205ENST00000641950 531 ntBASIC23.75■■□□□ 1.39
TNPO1Q92973 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TNPO1Q92973 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC23.75■■□□□ 1.39
TNPO1Q92973 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.75■■□□□ 1.39
TNPO1Q92973 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.75■■□□□ 1.39
TNPO1Q92973 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
TNPO1Q92973 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC23.74■■□□□ 1.39
TNPO1Q92973 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNPO1Q92973 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TNPO1Q92973 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNPO1Q92973 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
TNPO1Q92973 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TNPO1Q92973 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.74■■□□□ 1.39
TNPO1Q92973 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNPO1Q92973 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TNPO1Q92973 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.74■■□□□ 1.39
TNPO1Q92973 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.74■■□□□ 1.39
TNPO1Q92973 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.74■■□□□ 1.39
TNPO1Q92973 UBE2DNL-204ENST00000602536 740 ntBASIC23.74■■□□□ 1.39
TNPO1Q92973 MIR2861-201ENST00000636310 90 ntBASIC23.74■■□□□ 1.39
TNPO1Q92973 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TNPO1Q92973 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNPO1Q92973 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TNPO1Q92973 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNPO1Q92973 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNPO1Q92973 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.74■■□□□ 1.39
TNPO1Q92973 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNPO1Q92973 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TNPO1Q92973 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.74■■□□□ 1.39
TNPO1Q92973 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TNPO1Q92973 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TNPO1Q92973 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
TNPO1Q92973 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TNPO1Q92973 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TNPO1Q92973 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TNPO1Q92973 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
TNPO1Q92973 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.73■■□□□ 1.39
TNPO1Q92973 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms