Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PIK3C3Q8NEB9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PIK3C3Q8NEB9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 LETM1P2-201ENST00000597330 2178 ntBASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 AC034268.1-201ENST00000441047 882 ntBASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PIK3C3Q8NEB9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
PIK3C3Q8NEB9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.71■□□□□ 0.58
PIK3C3Q8NEB9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 DUX4L2-201ENST00000561772 1275 ntBASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 RARRES2P6-201ENST00000567333 442 ntBASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 DUX4L6-201ENST00000626483 1275 ntBASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 DUX4L1-201ENST00000627662 1275 ntBASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 DUX4L8-201ENST00000629013 1275 ntBASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 DUX4L3-201ENST00000630187 1275 ntBASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 DUX4L7-201ENST00000630678 1275 ntBASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 DUX4L5-201ENST00000630834 1275 ntBASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PIK3C3Q8NEB9 AC005332.7-201ENST00000614046 2005 ntBASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 AC026471.1-201ENST00000564629 3026 ntBASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 SLC7A5P2-201ENST00000553010 536 ntBASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 AC004408.2-201ENST00000623613 2777 ntBASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PIK3C3Q8NEB9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.68■□□□□ 0.58
PIK3C3Q8NEB9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PIK3C3Q8NEB9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PIK3C3Q8NEB9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
PIK3C3Q8NEB9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.68■□□□□ 0.58
PIK3C3Q8NEB9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PIK3C3Q8NEB9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PIK3C3Q8NEB9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PIK3C3Q8NEB9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.68■□□□□ 0.58
PIK3C3Q8NEB9 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.68■□□□□ 0.58
PIK3C3Q8NEB9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms