Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.52■□□□□ 0.4
CPEB3Q8NE35 AC099778.1-201ENST00000568593 1911 ntBASIC17.52■□□□□ 0.4
CPEB3Q8NE35 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.52■□□□□ 0.39
CPEB3Q8NE35 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPEB3Q8NE35 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPEB3Q8NE35 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPEB3Q8NE35 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPEB3Q8NE35 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPEB3Q8NE35 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 AC069152.1-201ENST00000438030 544 ntBASIC17.51■□□□□ 0.39
CPEB3Q8NE35 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 MYC-209ENST00000641252 345 ntBASIC17.51■□□□□ 0.39
CPEB3Q8NE35 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPEB3Q8NE35 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPEB3Q8NE35 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPEB3Q8NE35 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.5■□□□□ 0.39
CPEB3Q8NE35 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPEB3Q8NE35 AC112907.3-201ENST00000577781 2400 ntBASIC17.5■□□□□ 0.39
CPEB3Q8NE35 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.5■□□□□ 0.39
CPEB3Q8NE35 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CPEB3Q8NE35 AC073210.2-201ENST00000430369 194 ntBASIC17.5■□□□□ 0.39
CPEB3Q8NE35 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.5■□□□□ 0.39
CPEB3Q8NE35 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CPEB3Q8NE35 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.5■□□□□ 0.39
CPEB3Q8NE35 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPEB3Q8NE35 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CPEB3Q8NE35 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CPEB3Q8NE35 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CPEB3Q8NE35 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPEB3Q8NE35 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPEB3Q8NE35 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 AC097658.1-201ENST00000475555 843 ntBASIC17.49■□□□□ 0.39
CPEB3Q8NE35 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 AC133041.1-202ENST00000642053 222 ntBASIC17.49■□□□□ 0.39
CPEB3Q8NE35 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CPEB3Q8NE35 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms