Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 CLDN5-201ENST00000403084 2357 ntBASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 AIRN-201ENST00000601203 4374 ntBASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 HTR7P1-201ENST00000538670 1336 ntBASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF248Q8NDW4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF248Q8NDW4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ZNF248Q8NDW4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF248Q8NDW4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF248Q8NDW4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ZNF248Q8NDW4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF248Q8NDW4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF248Q8NDW4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
ZNF248Q8NDW4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ZNF248Q8NDW4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF248Q8NDW4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.16■□□□□ 0.66
ZNF248Q8NDW4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF248Q8NDW4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF248Q8NDW4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 KRT16P5-201ENST00000455284 522 ntBASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF248Q8NDW4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF248Q8NDW4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF248Q8NDW4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF248Q8NDW4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF248Q8NDW4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF248Q8NDW4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF248Q8NDW4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.14■□□□□ 0.65
ZNF248Q8NDW4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ZNF248Q8NDW4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF248Q8NDW4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF248Q8NDW4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF248Q8NDW4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ZNF248Q8NDW4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF248Q8NDW4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ZNF248Q8NDW4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF248Q8NDW4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF248Q8NDW4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF248Q8NDW4 AC005521.1-201ENST00000393351 872 ntBASIC19.13■□□□□ 0.65
ZNF248Q8NDW4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF248Q8NDW4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.13■□□□□ 0.65
ZNF248Q8NDW4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF248Q8NDW4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF248Q8NDW4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.13■□□□□ 0.65
ZNF248Q8NDW4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.13■□□□□ 0.65
ZNF248Q8NDW4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF248Q8NDW4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF248Q8NDW4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF248Q8NDW4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF248Q8NDW4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF248Q8NDW4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms