Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 pRNA.6-201ENST00000610482 90 ntBASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 pRNA.5-201ENST00000612139 90 ntBASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 pRNA.11-201ENST00000618423 90 ntBASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 pRNA.13-201ENST00000619112 90 ntBASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 AL117332.1-201ENST00000622628 974 ntBASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CROCCP3Q8IVE0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 LINC01465-201ENST00000408887 1940 ntBASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 AP006587.3-201ENST00000525742 1516 ntBASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CROCCP3Q8IVE0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 HSD17B1P1-201ENST00000590052 955 ntBASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CROCCP3Q8IVE0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CROCCP3Q8IVE0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CROCCP3Q8IVE0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CROCCP3Q8IVE0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CROCCP3Q8IVE0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.1■□□□□ 0.49
CROCCP3Q8IVE0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.1■□□□□ 0.49
CROCCP3Q8IVE0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CROCCP3Q8IVE0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.1■□□□□ 0.49
CROCCP3Q8IVE0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.1■□□□□ 0.49
CROCCP3Q8IVE0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.1■□□□□ 0.49
CROCCP3Q8IVE0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CROCCP3Q8IVE0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CROCCP3Q8IVE0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CROCCP3Q8IVE0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.1■□□□□ 0.49
CROCCP3Q8IVE0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms