Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.69■□□□□ 0.74
HPS6Q86YV9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HPS6Q86YV9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS6Q86YV9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS6Q86YV9 AP000974.1-201ENST00000623909 2387 ntBASIC19.69■□□□□ 0.74
HPS6Q86YV9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS6Q86YV9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.69■□□□□ 0.74
HPS6Q86YV9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HPS6Q86YV9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS6Q86YV9 FAM201B-201ENST00000458407 597 ntBASIC19.69■□□□□ 0.74
HPS6Q86YV9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HPS6Q86YV9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
HPS6Q86YV9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HPS6Q86YV9 AC013268.1-206ENST00000638368 961 ntBASIC19.69■□□□□ 0.74
HPS6Q86YV9 AC112229.1-201ENST00000639295 961 ntBASIC19.69■□□□□ 0.74
HPS6Q86YV9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS6Q86YV9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.69■□□□□ 0.74
HPS6Q86YV9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HPS6Q86YV9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.69■□□□□ 0.74
HPS6Q86YV9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS6Q86YV9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS6Q86YV9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS6Q86YV9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS6Q86YV9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS6Q86YV9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.69■□□□□ 0.74
HPS6Q86YV9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HPS6Q86YV9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS6Q86YV9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.68■□□□□ 0.74
HPS6Q86YV9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.68■□□□□ 0.74
HPS6Q86YV9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.68■□□□□ 0.74
HPS6Q86YV9 TSPY20P-201ENST00000450910 630 ntBASIC19.68■□□□□ 0.74
HPS6Q86YV9 MIR4758-201ENST00000577688 71 ntBASIC19.68■□□□□ 0.74
HPS6Q86YV9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HPS6Q86YV9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.68■□□□□ 0.74
HPS6Q86YV9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS6Q86YV9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HPS6Q86YV9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.68■□□□□ 0.74
HPS6Q86YV9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS6Q86YV9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HPS6Q86YV9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS6Q86YV9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HPS6Q86YV9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HPS6Q86YV9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS6Q86YV9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS6Q86YV9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HPS6Q86YV9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.67■□□□□ 0.74
HPS6Q86YV9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.67■□□□□ 0.74
HPS6Q86YV9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.67■□□□□ 0.74
HPS6Q86YV9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.67■□□□□ 0.74
HPS6Q86YV9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.67■□□□□ 0.74
HPS6Q86YV9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.67■□□□□ 0.74
HPS6Q86YV9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS6Q86YV9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS6Q86YV9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HPS6Q86YV9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS6Q86YV9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS6Q86YV9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.66■□□□□ 0.74
HPS6Q86YV9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.66■□□□□ 0.74
HPS6Q86YV9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS6Q86YV9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.66■□□□□ 0.74
HPS6Q86YV9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS6Q86YV9 CNN2P6-201ENST00000439038 900 ntBASIC19.66■□□□□ 0.74
HPS6Q86YV9 AC105036.2-201ENST00000569468 176 ntBASIC19.66■□□□□ 0.74
HPS6Q86YV9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS6Q86YV9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS6Q86YV9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS6Q86YV9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS6Q86YV9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS6Q86YV9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS6Q86YV9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.66■□□□□ 0.74
HPS6Q86YV9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HPS6Q86YV9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
HPS6Q86YV9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.66■□□□□ 0.74
HPS6Q86YV9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS6Q86YV9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS6Q86YV9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS6Q86YV9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HPS6Q86YV9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HPS6Q86YV9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS6Q86YV9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS6Q86YV9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS6Q86YV9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HPS6Q86YV9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS6Q86YV9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS6Q86YV9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HPS6Q86YV9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.65■□□□□ 0.74
HPS6Q86YV9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HPS6Q86YV9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS6Q86YV9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HPS6Q86YV9 AC007322.4-201ENST00000509611 723 ntBASIC19.65■□□□□ 0.74
HPS6Q86YV9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.65■□□□□ 0.74
HPS6Q86YV9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS6Q86YV9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HPS6Q86YV9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS6Q86YV9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS6Q86YV9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HPS6Q86YV9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HPS6Q86YV9 AC004408.2-201ENST00000623613 2777 ntBASIC19.64■□□□□ 0.73
HPS6Q86YV9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HPS6Q86YV9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms