Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC28Q86X40 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC28Q86X40 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.77■□□□□ 0.44
LRRC28Q86X40 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LRRC28Q86X40 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC28Q86X40 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC28Q86X40 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC28Q86X40 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC28Q86X40 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC28Q86X40 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC28Q86X40 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC28Q86X40 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC28Q86X40 AC005332.7-201ENST00000614046 2005 ntBASIC17.77■□□□□ 0.43
LRRC28Q86X40 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC28Q86X40 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC28Q86X40 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC28Q86X40 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC28Q86X40 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRRC28Q86X40 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRRC28Q86X40 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.76■□□□□ 0.43
LRRC28Q86X40 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC28Q86X40 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC28Q86X40 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC28Q86X40 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC28Q86X40 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC28Q86X40 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRC28Q86X40 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC28Q86X40 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRC28Q86X40 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.76■□□□□ 0.43
LRRC28Q86X40 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC28Q86X40 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC28Q86X40 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC28Q86X40 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.76■□□□□ 0.43
LRRC28Q86X40 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.76■□□□□ 0.43
LRRC28Q86X40 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC28Q86X40 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRC28Q86X40 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC28Q86X40 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC28Q86X40 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC28Q86X40 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC28Q86X40 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LRRC28Q86X40 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC28Q86X40 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC28Q86X40 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC28Q86X40 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC28Q86X40 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LRRC28Q86X40 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC28Q86X40 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC28Q86X40 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC28Q86X40 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LRRC28Q86X40 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC28Q86X40 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC28Q86X40 AC010141.2-201ENST00000452426 721 ntBASIC17.75■□□□□ 0.43
LRRC28Q86X40 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.75■□□□□ 0.43
LRRC28Q86X40 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRC28Q86X40 RARRES2P11-201ENST00000635158 484 ntBASIC17.75■□□□□ 0.43
LRRC28Q86X40 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC28Q86X40 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC28Q86X40 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRC28Q86X40 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LRRC28Q86X40 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC28Q86X40 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC28Q86X40 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC28Q86X40 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC28Q86X40 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC28Q86X40 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC28Q86X40 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
LRRC28Q86X40 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.74■□□□□ 0.43
LRRC28Q86X40 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC28Q86X40 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRC28Q86X40 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC28Q86X40 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC28Q86X40 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC28Q86X40 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC28Q86X40 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC28Q86X40 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC28Q86X40 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LRRC28Q86X40 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRC28Q86X40 KRT18P20-201ENST00000548986 1279 ntBASIC17.74■□□□□ 0.43
LRRC28Q86X40 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.74■□□□□ 0.43
LRRC28Q86X40 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.74■□□□□ 0.43
LRRC28Q86X40 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC28Q86X40 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC28Q86X40 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC28Q86X40 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC28Q86X40 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC28Q86X40 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC28Q86X40 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LRRC28Q86X40 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC28Q86X40 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRC28Q86X40 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
LRRC28Q86X40 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC28Q86X40 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LRRC28Q86X40 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC28Q86X40 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC28Q86X40 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC28Q86X40 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LRRC28Q86X40 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LRRC28Q86X40 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC28Q86X40 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms