Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 DPP3P2-201ENST00000416030 1696 ntBASIC19.67■□□□□ 0.74
SYVN1Q86TM6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.67■□□□□ 0.74
SYVN1Q86TM6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 RARRES2P4-201ENST00000514074 484 ntBASIC19.66■□□□□ 0.74
SYVN1Q86TM6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 FAM21FP-204ENST00000608637 956 ntBASIC19.66■□□□□ 0.74
SYVN1Q86TM6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 AC066615.1-201ENST00000640911 628 ntBASIC19.66■□□□□ 0.74
SYVN1Q86TM6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SYVN1Q86TM6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYVN1Q86TM6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYVN1Q86TM6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.65■□□□□ 0.74
SYVN1Q86TM6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYVN1Q86TM6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYVN1Q86TM6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYVN1Q86TM6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYVN1Q86TM6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYVN1Q86TM6 CDV3P1-201ENST00000471403 739 ntBASIC19.65■□□□□ 0.74
SYVN1Q86TM6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.65■□□□□ 0.74
SYVN1Q86TM6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.65■□□□□ 0.74
SYVN1Q86TM6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.65■□□□□ 0.74
SYVN1Q86TM6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYVN1Q86TM6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYVN1Q86TM6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYVN1Q86TM6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.64■□□□□ 0.74
SYVN1Q86TM6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SYVN1Q86TM6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.64■□□□□ 0.74
SYVN1Q86TM6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SYVN1Q86TM6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SYVN1Q86TM6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SYVN1Q86TM6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SYVN1Q86TM6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYVN1Q86TM6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SYVN1Q86TM6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.64■□□□□ 0.73
SYVN1Q86TM6 AC097658.1-201ENST00000475555 843 ntBASIC19.64■□□□□ 0.73
SYVN1Q86TM6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.64■□□□□ 0.73
SYVN1Q86TM6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.64■□□□□ 0.73
SYVN1Q86TM6 AC010980.2-201ENST00000587099 1412 ntBASIC19.64■□□□□ 0.73
SYVN1Q86TM6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYVN1Q86TM6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYVN1Q86TM6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYVN1Q86TM6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.64■□□□□ 0.73
SYVN1Q86TM6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYVN1Q86TM6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYVN1Q86TM6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYVN1Q86TM6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.64■□□□□ 0.73
SYVN1Q86TM6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYVN1Q86TM6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SYVN1Q86TM6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 ITM2C-210ENST00000620962 501 ntBASIC19.63■□□□□ 0.73
SYVN1Q86TM6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYVN1Q86TM6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms