Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 PGM5P4-201ENST00000421970 445 ntBASIC14.03□□□□□ -0.16
CSMD3Q7Z407 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 AP005242.2-201ENST00000580065 1175 ntBASIC14.03□□□□□ -0.16
CSMD3Q7Z407 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 DGCR10-201ENST00000609839 495 ntBASIC14.03□□□□□ -0.16
CSMD3Q7Z407 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD3Q7Z407 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSMD3Q7Z407 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CSMD3Q7Z407 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
CSMD3Q7Z407 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.02□□□□□ -0.16
CSMD3Q7Z407 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CSMD3Q7Z407 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSMD3Q7Z407 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSMD3Q7Z407 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CSMD3Q7Z407 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.02□□□□□ -0.16
CSMD3Q7Z407 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CSMD3Q7Z407 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSMD3Q7Z407 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.02□□□□□ -0.17
CSMD3Q7Z407 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CSMD3Q7Z407 AP000550.4-202ENST00000639755 178 ntBASIC14.02□□□□□ -0.17
CSMD3Q7Z407 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSMD3Q7Z407 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CSMD3Q7Z407 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CSMD3Q7Z407 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSMD3Q7Z407 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSMD3Q7Z407 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
CSMD3Q7Z407 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
CSMD3Q7Z407 AC139887.4-201ENST00000607877 719 ntBASIC14.02□□□□□ -0.17
CSMD3Q7Z407 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSMD3Q7Z407 PTBP1P-201ENST00000554374 1601 ntBASIC14.02□□□□□ -0.17
CSMD3Q7Z407 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 NAPSB-206ENST00000562112 1266 ntBASIC14.01□□□□□ -0.17
CSMD3Q7Z407 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 AC091076.1-201ENST00000610741 619 ntBASIC14.01□□□□□ -0.17
CSMD3Q7Z407 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.01□□□□□ -0.17
CSMD3Q7Z407 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD3Q7Z407 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC14□□□□□ -0.17
CSMD3Q7Z407 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD3Q7Z407 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD3Q7Z407 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14□□□□□ -0.17
CSMD3Q7Z407 ATP5G1P1-201ENST00000448724 379 ntBASIC14□□□□□ -0.17
CSMD3Q7Z407 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14□□□□□ -0.17
CSMD3Q7Z407 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14□□□□□ -0.17
CSMD3Q7Z407 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14□□□□□ -0.17
CSMD3Q7Z407 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD3Q7Z407 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC14□□□□□ -0.17
CSMD3Q7Z407 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC14□□□□□ -0.17
CSMD3Q7Z407 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14□□□□□ -0.17
CSMD3Q7Z407 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CSMD3Q7Z407 AC117947.1-201ENST00000427448 529 ntBASIC14□□□□□ -0.17
CSMD3Q7Z407 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CSMD3Q7Z407 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14□□□□□ -0.17
CSMD3Q7Z407 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD3Q7Z407 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14□□□□□ -0.17
CSMD3Q7Z407 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CSMD3Q7Z407 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD3Q7Z407 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CSMD3Q7Z407 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14□□□□□ -0.17
CSMD3Q7Z407 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14□□□□□ -0.17
CSMD3Q7Z407 AL450487.1-201ENST00000426799 995 ntBASIC14□□□□□ -0.17
CSMD3Q7Z407 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14□□□□□ -0.17
CSMD3Q7Z407 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14□□□□□ -0.17
CSMD3Q7Z407 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms