Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.4■■□□□ 1.66
COPS6Q7L5N1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
COPS6Q7L5N1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COPS6Q7L5N1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
COPS6Q7L5N1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC25.39■■□□□ 1.66
COPS6Q7L5N1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.39■■□□□ 1.66
COPS6Q7L5N1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
COPS6Q7L5N1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC25.39■■□□□ 1.66
COPS6Q7L5N1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.39■■□□□ 1.66
COPS6Q7L5N1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
COPS6Q7L5N1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC25.39■■□□□ 1.66
COPS6Q7L5N1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
COPS6Q7L5N1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
COPS6Q7L5N1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
COPS6Q7L5N1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
COPS6Q7L5N1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC25.39■■□□□ 1.66
COPS6Q7L5N1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC25.39■■□□□ 1.66
COPS6Q7L5N1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
COPS6Q7L5N1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COPS6Q7L5N1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
COPS6Q7L5N1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
COPS6Q7L5N1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC25.38■■□□□ 1.65
COPS6Q7L5N1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.38■■□□□ 1.65
COPS6Q7L5N1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COPS6Q7L5N1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COPS6Q7L5N1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.38■■□□□ 1.65
COPS6Q7L5N1 GXYLT1P3-201ENST00000453058 1193 ntBASIC25.38■■□□□ 1.65
COPS6Q7L5N1 KRT16P5-201ENST00000455284 522 ntBASIC25.38■■□□□ 1.65
COPS6Q7L5N1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC25.38■■□□□ 1.65
COPS6Q7L5N1 AP001412.1-201ENST00000608405 714 ntBASIC25.38■■□□□ 1.65
COPS6Q7L5N1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COPS6Q7L5N1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
COPS6Q7L5N1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC25.38■■□□□ 1.65
COPS6Q7L5N1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC25.38■■□□□ 1.65
COPS6Q7L5N1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COPS6Q7L5N1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COPS6Q7L5N1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COPS6Q7L5N1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COPS6Q7L5N1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COPS6Q7L5N1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
COPS6Q7L5N1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COPS6Q7L5N1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.37■■□□□ 1.65
COPS6Q7L5N1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC25.37■■□□□ 1.65
COPS6Q7L5N1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COPS6Q7L5N1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC25.37■■□□□ 1.65
COPS6Q7L5N1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC25.37■■□□□ 1.65
COPS6Q7L5N1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
COPS6Q7L5N1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC25.37■■□□□ 1.65
COPS6Q7L5N1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COPS6Q7L5N1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
COPS6Q7L5N1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.36■■□□□ 1.65
COPS6Q7L5N1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC25.36■■□□□ 1.65
COPS6Q7L5N1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COPS6Q7L5N1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC25.36■■□□□ 1.65
COPS6Q7L5N1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COPS6Q7L5N1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
COPS6Q7L5N1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COPS6Q7L5N1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
COPS6Q7L5N1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COPS6Q7L5N1 TSPY15P-201ENST00000457163 923 ntBASIC25.36■■□□□ 1.65
COPS6Q7L5N1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.36■■□□□ 1.65
COPS6Q7L5N1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC25.36■■□□□ 1.65
COPS6Q7L5N1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC25.36■■□□□ 1.65
COPS6Q7L5N1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COPS6Q7L5N1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC25.36■■□□□ 1.65
COPS6Q7L5N1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COPS6Q7L5N1 HTR7P1-201ENST00000538670 1336 ntBASIC25.36■■□□□ 1.65
COPS6Q7L5N1 AC092720.2-201ENST00000602388 1665 ntBASIC25.36■■□□□ 1.65
COPS6Q7L5N1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC25.35■■□□□ 1.65
COPS6Q7L5N1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC25.35■■□□□ 1.65
COPS6Q7L5N1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COPS6Q7L5N1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COPS6Q7L5N1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC25.35■■□□□ 1.65
COPS6Q7L5N1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
COPS6Q7L5N1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC25.35■■□□□ 1.65
COPS6Q7L5N1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COPS6Q7L5N1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COPS6Q7L5N1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.35■■□□□ 1.65
COPS6Q7L5N1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COPS6Q7L5N1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COPS6Q7L5N1 KRT17P2-201ENST00000300992 1314 ntBASIC25.35■■□□□ 1.65
COPS6Q7L5N1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COPS6Q7L5N1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
COPS6Q7L5N1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COPS6Q7L5N1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
COPS6Q7L5N1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COPS6Q7L5N1 SAPCD2P4-201ENST00000424595 1171 ntBASIC25.34■■□□□ 1.65
COPS6Q7L5N1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.34■■□□□ 1.65
COPS6Q7L5N1 PENK-204ENST00000518770 863 ntTSL 2 BASIC25.34■■□□□ 1.65
COPS6Q7L5N1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC25.34■■□□□ 1.65
COPS6Q7L5N1 AF186192.3-201ENST00000583427 947 ntBASIC25.34■■□□□ 1.65
COPS6Q7L5N1 AC073912.3-201ENST00000624414 853 ntBASIC25.34■■□□□ 1.65
COPS6Q7L5N1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COPS6Q7L5N1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COPS6Q7L5N1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
COPS6Q7L5N1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COPS6Q7L5N1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC25.33■■□□□ 1.65
COPS6Q7L5N1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
COPS6Q7L5N1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC25.33■■□□□ 1.65
COPS6Q7L5N1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms