Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.91■□□□□ 0.94
TRNP1Q6NT89 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.91■□□□□ 0.94
TRNP1Q6NT89 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRNP1Q6NT89 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.91■□□□□ 0.94
TRNP1Q6NT89 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRNP1Q6NT89 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.91■□□□□ 0.94
TRNP1Q6NT89 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
TRNP1Q6NT89 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.9■□□□□ 0.94
TRNP1Q6NT89 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRNP1Q6NT89 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRNP1Q6NT89 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRNP1Q6NT89 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.9■□□□□ 0.94
TRNP1Q6NT89 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRNP1Q6NT89 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.9■□□□□ 0.94
TRNP1Q6NT89 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRNP1Q6NT89 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.9■□□□□ 0.94
TRNP1Q6NT89 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRNP1Q6NT89 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.9■□□□□ 0.94
TRNP1Q6NT89 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRNP1Q6NT89 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRNP1Q6NT89 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRNP1Q6NT89 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRNP1Q6NT89 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRNP1Q6NT89 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.89■□□□□ 0.94
TRNP1Q6NT89 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRNP1Q6NT89 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRNP1Q6NT89 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRNP1Q6NT89 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.89■□□□□ 0.93
TRNP1Q6NT89 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.89■□□□□ 0.93
TRNP1Q6NT89 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TRNP1Q6NT89 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRNP1Q6NT89 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRNP1Q6NT89 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.89■□□□□ 0.93
TRNP1Q6NT89 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.89■□□□□ 0.93
TRNP1Q6NT89 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.89■□□□□ 0.93
TRNP1Q6NT89 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.89■□□□□ 0.93
TRNP1Q6NT89 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.89■□□□□ 0.93
TRNP1Q6NT89 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TRNP1Q6NT89 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRNP1Q6NT89 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRNP1Q6NT89 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRNP1Q6NT89 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.89■□□□□ 0.93
TRNP1Q6NT89 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.89■□□□□ 0.93
TRNP1Q6NT89 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.89■□□□□ 0.93
TRNP1Q6NT89 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRNP1Q6NT89 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRNP1Q6NT89 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRNP1Q6NT89 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRNP1Q6NT89 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRNP1Q6NT89 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRNP1Q6NT89 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRNP1Q6NT89 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRNP1Q6NT89 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.88■□□□□ 0.93
TRNP1Q6NT89 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.88■□□□□ 0.93
TRNP1Q6NT89 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
TRNP1Q6NT89 AC005829.2-201ENST00000571422 1056 ntBASIC20.88■□□□□ 0.93
TRNP1Q6NT89 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.88■□□□□ 0.93
TRNP1Q6NT89 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TRNP1Q6NT89 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRNP1Q6NT89 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRNP1Q6NT89 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.88■□□□□ 0.93
TRNP1Q6NT89 AC125437.2-201ENST00000625180 2167 ntBASIC20.87■□□□□ 0.93
TRNP1Q6NT89 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 HLA-B-256ENST00000639848 1089 ntBASIC20.87■□□□□ 0.93
TRNP1Q6NT89 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRNP1Q6NT89 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRNP1Q6NT89 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRNP1Q6NT89 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TRNP1Q6NT89 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TRNP1Q6NT89 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.86■□□□□ 0.93
TRNP1Q6NT89 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.86■□□□□ 0.93
TRNP1Q6NT89 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TRNP1Q6NT89 AC006557.6-201ENST00000623071 864 ntBASIC20.86■□□□□ 0.93
TRNP1Q6NT89 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRNP1Q6NT89 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRNP1Q6NT89 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRNP1Q6NT89 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.86■□□□□ 0.93
TRNP1Q6NT89 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms