Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDKAL1Q5VV42 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDKAL1Q5VV42 MCRIP2P1-201ENST00000394346 511 ntBASIC21.93■■□□□ 1.1
CDKAL1Q5VV42 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.93■■□□□ 1.1
CDKAL1Q5VV42 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDKAL1Q5VV42 CNN2P6-201ENST00000439038 900 ntBASIC21.93■■□□□ 1.1
CDKAL1Q5VV42 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDKAL1Q5VV42 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.93■■□□□ 1.1
CDKAL1Q5VV42 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.93■■□□□ 1.1
CDKAL1Q5VV42 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDKAL1Q5VV42 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.93■■□□□ 1.1
CDKAL1Q5VV42 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKAL1Q5VV42 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKAL1Q5VV42 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.91■■□□□ 1.1
CDKAL1Q5VV42 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.91■■□□□ 1.1
CDKAL1Q5VV42 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKAL1Q5VV42 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKAL1Q5VV42 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKAL1Q5VV42 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDKAL1Q5VV42 KRT18P11-201ENST00000435214 1283 ntBASIC21.91■■□□□ 1.1
CDKAL1Q5VV42 AL031963.3-201ENST00000606441 850 ntBASIC21.91■■□□□ 1.1
CDKAL1Q5VV42 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.91■■□□□ 1.1
CDKAL1Q5VV42 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.91■■□□□ 1.1
CDKAL1Q5VV42 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKAL1Q5VV42 RNF165-205ENST00000588679 2904 ntBASIC21.91■■□□□ 1.1
CDKAL1Q5VV42 AL020996.1-203ENST00000536896 2307 ntBASIC21.91■■□□□ 1.1
CDKAL1Q5VV42 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.91■■□□□ 1.1
CDKAL1Q5VV42 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDKAL1Q5VV42 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 AC068338.2-201ENST00000563278 1430 ntBASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 AP000974.1-201ENST00000623909 2387 ntBASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 AC105020.6-201ENST00000621523 1217 ntBASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDKAL1Q5VV42 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDKAL1Q5VV42 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.1
CDKAL1Q5VV42 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDKAL1Q5VV42 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDKAL1Q5VV42 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.89■■□□□ 1.1
CDKAL1Q5VV42 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.89■■□□□ 1.1
CDKAL1Q5VV42 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 DUX4L16-201ENST00000555130 1264 ntBASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 MIR6821-201ENST00000617625 74 ntBASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CDKAL1Q5VV42 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKAL1Q5VV42 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKAL1Q5VV42 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKAL1Q5VV42 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDKAL1Q5VV42 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKAL1Q5VV42 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CDKAL1Q5VV42 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDKAL1Q5VV42 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.88■■□□□ 1.09
CDKAL1Q5VV42 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKAL1Q5VV42 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKAL1Q5VV42 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms