Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
VARS2Q5ST30 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VARS2Q5ST30 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VARS2Q5ST30 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.27■■□□□ 1
VARS2Q5ST30 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.27■■□□□ 1
VARS2Q5ST30 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.27■■□□□ 1
VARS2Q5ST30 AP001412.1-201ENST00000608405 714 ntBASIC21.27■■□□□ 1
VARS2Q5ST30 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
VARS2Q5ST30 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.27■■□□□ 1
VARS2Q5ST30 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VARS2Q5ST30 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.27■■□□□ 1
VARS2Q5ST30 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.27■■□□□ 1
VARS2Q5ST30 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.27■■□□□ 1
VARS2Q5ST30 DPP3P2-201ENST00000416030 1696 ntBASIC21.27■■□□□ 1
VARS2Q5ST30 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VARS2Q5ST30 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.27■□□□□ 0.99
VARS2Q5ST30 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.27■□□□□ 0.99
VARS2Q5ST30 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.26■□□□□ 0.99
VARS2Q5ST30 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
VARS2Q5ST30 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
VARS2Q5ST30 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VARS2Q5ST30 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VARS2Q5ST30 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
VARS2Q5ST30 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VARS2Q5ST30 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.26■□□□□ 0.99
VARS2Q5ST30 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
VARS2Q5ST30 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
VARS2Q5ST30 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
VARS2Q5ST30 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.26■□□□□ 0.99
VARS2Q5ST30 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VARS2Q5ST30 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.26■□□□□ 0.99
VARS2Q5ST30 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VARS2Q5ST30 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VARS2Q5ST30 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.26■□□□□ 0.99
VARS2Q5ST30 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.26■□□□□ 0.99
VARS2Q5ST30 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VARS2Q5ST30 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
VARS2Q5ST30 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VARS2Q5ST30 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VARS2Q5ST30 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.26■□□□□ 0.99
VARS2Q5ST30 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.26■□□□□ 0.99
VARS2Q5ST30 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VARS2Q5ST30 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
VARS2Q5ST30 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VARS2Q5ST30 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
VARS2Q5ST30 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VARS2Q5ST30 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VARS2Q5ST30 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
VARS2Q5ST30 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
VARS2Q5ST30 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.25■□□□□ 0.99
VARS2Q5ST30 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.25■□□□□ 0.99
VARS2Q5ST30 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VARS2Q5ST30 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VARS2Q5ST30 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.25■□□□□ 0.99
VARS2Q5ST30 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
VARS2Q5ST30 AC113410.3-201ENST00000623366 203 ntBASIC21.25■□□□□ 0.99
VARS2Q5ST30 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VARS2Q5ST30 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
VARS2Q5ST30 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VARS2Q5ST30 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VARS2Q5ST30 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
VARS2Q5ST30 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.24■□□□□ 0.99
VARS2Q5ST30 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VARS2Q5ST30 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VARS2Q5ST30 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VARS2Q5ST30 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.24■□□□□ 0.99
VARS2Q5ST30 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
VARS2Q5ST30 KRT16P5-201ENST00000455284 522 ntBASIC21.24■□□□□ 0.99
VARS2Q5ST30 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
VARS2Q5ST30 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VARS2Q5ST30 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VARS2Q5ST30 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.24■□□□□ 0.99
VARS2Q5ST30 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.24■□□□□ 0.99
VARS2Q5ST30 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
VARS2Q5ST30 LINC01023-201ENST00000606054 436 ntBASIC21.24■□□□□ 0.99
VARS2Q5ST30 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.24■□□□□ 0.99
VARS2Q5ST30 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VARS2Q5ST30 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VARS2Q5ST30 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VARS2Q5ST30 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VARS2Q5ST30 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VARS2Q5ST30 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VARS2Q5ST30 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VARS2Q5ST30 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VARS2Q5ST30 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VARS2Q5ST30 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VARS2Q5ST30 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.23■□□□□ 0.99
VARS2Q5ST30 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VARS2Q5ST30 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.23■□□□□ 0.99
VARS2Q5ST30 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.23■□□□□ 0.99
VARS2Q5ST30 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.23■□□□□ 0.99
VARS2Q5ST30 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VARS2Q5ST30 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VARS2Q5ST30 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VARS2Q5ST30 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VARS2Q5ST30 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
VARS2Q5ST30 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.23■□□□□ 0.99
VARS2Q5ST30 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
VARS2Q5ST30 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.23■□□□□ 0.99
VARS2Q5ST30 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms