Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.52■■□□□ 1.36
CERKLQ49MI3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CERKLQ49MI3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CERKLQ49MI3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CERKLQ49MI3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.52■■□□□ 1.36
CERKLQ49MI3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.52■■□□□ 1.36
CERKLQ49MI3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CERKLQ49MI3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.52■■□□□ 1.36
CERKLQ49MI3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.52■■□□□ 1.36
CERKLQ49MI3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CERKLQ49MI3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CERKLQ49MI3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.52■■□□□ 1.36
CERKLQ49MI3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.52■■□□□ 1.36
CERKLQ49MI3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CERKLQ49MI3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CERKLQ49MI3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CERKLQ49MI3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.52■■□□□ 1.36
CERKLQ49MI3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CERKLQ49MI3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.35
CERKLQ49MI3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CERKLQ49MI3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CERKLQ49MI3 DPP3P2-201ENST00000416030 1696 ntBASIC23.51■■□□□ 1.35
CERKLQ49MI3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CERKLQ49MI3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CERKLQ49MI3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CERKLQ49MI3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CERKLQ49MI3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CERKLQ49MI3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CERKLQ49MI3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.51■■□□□ 1.35
CERKLQ49MI3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.51■■□□□ 1.35
CERKLQ49MI3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CERKLQ49MI3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.51■■□□□ 1.35
CERKLQ49MI3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.51■■□□□ 1.35
CERKLQ49MI3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
CERKLQ49MI3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.51■■□□□ 1.35
CERKLQ49MI3 MIR4785-201ENST00000585005 73 ntBASIC23.51■■□□□ 1.35
CERKLQ49MI3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.51■■□□□ 1.35
CERKLQ49MI3 REXO1L12P-201ENST00000622156 912 ntBASIC23.51■■□□□ 1.35
CERKLQ49MI3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CERKLQ49MI3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.51■■□□□ 1.35
CERKLQ49MI3 HTR7P1-201ENST00000538670 1336 ntBASIC23.51■■□□□ 1.35
CERKLQ49MI3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CERKLQ49MI3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CERKLQ49MI3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
CERKLQ49MI3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CERKLQ49MI3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CERKLQ49MI3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
CERKLQ49MI3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
CERKLQ49MI3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.5■■□□□ 1.35
CERKLQ49MI3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CERKLQ49MI3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
CERKLQ49MI3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.5■■□□□ 1.35
CERKLQ49MI3 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.5■■□□□ 1.35
CERKLQ49MI3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.5■■□□□ 1.35
CERKLQ49MI3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.5■■□□□ 1.35
CERKLQ49MI3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CERKLQ49MI3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CERKLQ49MI3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CERKLQ49MI3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CERKLQ49MI3 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.49■■□□□ 1.35
CERKLQ49MI3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CERKLQ49MI3 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.49■■□□□ 1.35
CERKLQ49MI3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CERKLQ49MI3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.49■■□□□ 1.35
CERKLQ49MI3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.49■■□□□ 1.35
CERKLQ49MI3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.49■■□□□ 1.35
CERKLQ49MI3 AF186192.3-201ENST00000583427 947 ntBASIC23.49■■□□□ 1.35
CERKLQ49MI3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CERKLQ49MI3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CERKLQ49MI3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CERKLQ49MI3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CERKLQ49MI3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
CERKLQ49MI3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.48■■□□□ 1.35
CERKLQ49MI3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CERKLQ49MI3 BX088651.1-201ENST00000540551 451 ntBASIC23.48■■□□□ 1.35
CERKLQ49MI3 AC004264.1-201ENST00000608354 794 ntBASIC23.48■■□□□ 1.35
CERKLQ49MI3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
CERKLQ49MI3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CERKLQ49MI3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CERKLQ49MI3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CERKLQ49MI3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
CERKLQ49MI3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CERKLQ49MI3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CERKLQ49MI3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.47■■□□□ 1.35
CERKLQ49MI3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.47■■□□□ 1.35
CERKLQ49MI3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.47■■□□□ 1.35
CERKLQ49MI3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CERKLQ49MI3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CERKLQ49MI3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
CERKLQ49MI3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.47■■□□□ 1.35
CERKLQ49MI3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.47■■□□□ 1.35
CERKLQ49MI3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.47■■□□□ 1.35
CERKLQ49MI3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CERKLQ49MI3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CERKLQ49MI3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CERKLQ49MI3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CERKLQ49MI3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CERKLQ49MI3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.46■■□□□ 1.35
CERKLQ49MI3 AC211429.1-201ENST00000415277 523 ntBASIC23.46■■□□□ 1.35
CERKLQ49MI3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms