Protein–RNA interactions for Protein: Q3E827

LSO1, Protein LSO1, yeastyeast

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSO1Q3E827 YKL100W-AYKL100W-A 90 nt2.22□□□□□ -2.05
LSO1Q3E827 ALY2YJL084C 3141 nt2.22□□□□□ -2.05
LSO1Q3E827 SEC16YPL085W 6588 nt2.22□□□□□ -2.05
LSO1Q3E827 SCD5YOR329C 2619 nt2.21□□□□□ -2.05
LSO1Q3E827 BPH1YCR032W 6504 nt2.21□□□□□ -2.06
LSO1Q3E827 KIP1YBL063W 3336 nt2.21□□□□□ -2.06
LSO1Q3E827 POL5YEL055C 3069 nt2.21□□□□□ -2.06
LSO1Q3E827 SMC1YFL008W 3678 nt2.21□□□□□ -2.06
LSO1Q3E827 YLL020CYLL020C 306 nt2.21□□□□□ -2.06
LSO1Q3E827 COA6YMR244C-A 315 nt2.21□□□□□ -2.06
LSO1Q3E827 YNL103W-AYNL103W-A 90 nt2.21□□□□□ -2.06
LSO1Q3E827 SLN1YIL147C 3663 nt2.21□□□□□ -2.06
LSO1Q3E827 PAN2YGL094C 3348 nt2.2□□□□□ -2.06
LSO1Q3E827 YLR282CYLR282C 342 nt2.2□□□□□ -2.06
LSO1Q3E827 ATG9YDL149W 2994 nt2.2□□□□□ -2.06
LSO1Q3E827 NEO1YIL048W 3456 nt2.2□□□□□ -2.06
LSO1Q3E827 PDR8YLR266C 2106 nt2.2□□□□□ -2.06
LSO1Q3E827 YMR045CYMR045C 5268 nt2.19□□□□□ -2.06
LSO1Q3E827 SGS1YMR190C 4344 nt2.19□□□□□ -2.06
LSO1Q3E827 SOM1YEL059C-A 225 nt2.19□□□□□ -2.06
LSO1Q3E827 GYP5YPL249C 2685 nt2.18□□□□□ -2.06
LSO1Q3E827 MGA2YIR033W 3342 nt2.18□□□□□ -2.06
LSO1Q3E827 BFR2YDR299W 1605 nt2.18□□□□□ -2.06
LSO1Q3E827 MBB1YJL199C 327 nt2.18□□□□□ -2.06
LSO1Q3E827 YPP1YGR198W 2454 nt2.18□□□□□ -2.06
LSO1Q3E827 SPP41YDR464W 4308 nt2.17□□□□□ -2.06
LSO1Q3E827 SLX4YLR135W 2247 nt2.17□□□□□ -2.06
LSO1Q3E827 INO80YGL150C 4470 nt2.17□□□□□ -2.06
LSO1Q3E827 YHR217CYHR217C 462 nt2.16□□□□□ -2.06
LSO1Q3E827 YNL067W-BYNL067W-B 141 nt2.16□□□□□ -2.06
LSO1Q3E827 YOR161W-AYOR161W-A 81 nt2.16□□□□□ -2.06
LSO1Q3E827 TBS1YBR150C 3285 nt2.16□□□□□ -2.06
LSO1Q3E827 SMC4YLR086W 4257 nt2.16□□□□□ -2.06
LSO1Q3E827 YAR009CYAR009C 3591 nt2.15□□□□□ -2.06
LSO1Q3E827 MSB1YOR188W 3414 nt2.15□□□□□ -2.06
LSO1Q3E827 snR61snR61 90 nt2.15□□□□□ -2.07
LSO1Q3E827 COX5BYIL111W 456 nt2.15□□□□□ -2.07
LSO1Q3E827 YJL052C-AYJL052C-A 120 nt2.15□□□□□ -2.07
LSO1Q3E827 snR70snR70 164 nt2.14□□□□□ -2.07
LSO1Q3E827 YBL039C-AYBL039C-A 84 nt2.14□□□□□ -2.07
LSO1Q3E827 SKI3YPR189W 4299 nt2.12□□□□□ -2.07
LSO1Q3E827 QCR9YGR183C 201 nt2.12□□□□□ -2.07
LSO1Q3E827 PDR3YBL005W 2931 nt2.12□□□□□ -2.07
LSO1Q3E827 DNA2YHR164C 4569 nt2.12□□□□□ -2.07
LSO1Q3E827 NUP170YBL079W 4509 nt2.11□□□□□ -2.07
LSO1Q3E827 snR14snR14 160 nt2.11□□□□□ -2.07
LSO1Q3E827 YLR419WYLR419W 4308 nt2.1□□□□□ -2.07
LSO1Q3E827 STB6YKL072W 2301 nt2.09□□□□□ -2.07
LSO1Q3E827 TAH1YCR060W 336 nt2.09□□□□□ -2.07
LSO1Q3E827 YML002WYML002W 2214 nt2.09□□□□□ -2.08
LSO1Q3E827 YDL247W-AYDL247W-A 75 nt2.08□□□□□ -2.08
LSO1Q3E827 tC(GCA)BtC(GCA)B 72 nt2.07□□□□□ -2.08
LSO1Q3E827 tC(GCA)GtC(GCA)G 72 nt2.07□□□□□ -2.08
LSO1Q3E827 tC(GCA)P1tC(GCA)P1 72 nt2.07□□□□□ -2.08
LSO1Q3E827 tC(GCA)P2tC(GCA)P2 72 nt2.07□□□□□ -2.08
LSO1Q3E827 EAF1YDR359C 2949 nt2.07□□□□□ -2.08
LSO1Q3E827 YHR214C-BYHR214C-B 5382 nt2.06□□□□□ -2.08
LSO1Q3E827 SEC31YDL195W 3822 nt2.04□□□□□ -2.08
LSO1Q3E827 KCS1YDR017C 3153 nt2.04□□□□□ -2.08
LSO1Q3E827 TMA7YLR262C-A 195 nt2.04□□□□□ -2.08
LSO1Q3E827 TFC3YAL001C 3483 nt2.03□□□□□ -2.08
LSO1Q3E827 MYO2YOR326W 4725 nt2.03□□□□□ -2.08
LSO1Q3E827 STO1YMR125W 2586 nt2.03□□□□□ -2.08
LSO1Q3E827 tM(CAU)Q2tM(CAU)Q2 78 nt2.03□□□□□ -2.08
LSO1Q3E827 STF2YGR008C 255 nt2.03□□□□□ -2.08
LSO1Q3E827 DGR1YNL130C-A 147 nt2.03□□□□□ -2.08
LSO1Q3E827 NOP9YJL010C 2001 nt2.03□□□□□ -2.08
LSO1Q3E827 SEC21YNL287W 2808 nt2.03□□□□□ -2.09
LSO1Q3E827 KAP122YGL016W 3246 nt2.02□□□□□ -2.09
LSO1Q3E827 BRE1YDL074C 2103 nt2.02□□□□□ -2.09
LSO1Q3E827 SBH1YER087C-B 249 nt2.02□□□□□ -2.09
LSO1Q3E827 FKS1YLR342W 5631 nt2.02□□□□□ -2.09
LSO1Q3E827 SET3YKR029C 2256 nt2.01□□□□□ -2.09
LSO1Q3E827 YOL019W-AYOL019W-A 153 nt2.01□□□□□ -2.09
LSO1Q3E827 snR39BsnR39B 96 nt2.01□□□□□ -2.09
LSO1Q3E827 YLR422WYLR422W 5799 nt2.01□□□□□ -2.09
LSO1Q3E827 YCS4YLR272C 3531 nt2.01□□□□□ -2.09
LSO1Q3E827 MON2YNL297C 4911 nt2□□□□□ -2.09
LSO1Q3E827 UFD4YKL010C 4452 nt2□□□□□ -2.09
LSO1Q3E827 YHR131W-AYHR131W-A 246 nt2□□□□□ -2.09
LSO1Q3E827 YMR247W-AYMR247W-A 144 nt2□□□□□ -2.09
LSO1Q3E827 NUP157YER105C 4176 nt2□□□□□ -2.09
LSO1Q3E827 WAR1YML076C 2835 nt1.99□□□□□ -2.09
LSO1Q3E827 tT(UGU)HtT(UGU)H 72 nt1.99□□□□□ -2.09
LSO1Q3E827 FYV10YIL097W 1551 nt1.98□□□□□ -2.09
LSO1Q3E827 YGL041C-BYGL041C-B 183 nt1.98□□□□□ -2.09
LSO1Q3E827 RTP1YMR185W 2946 nt1.97□□□□□ -2.09
LSO1Q3E827 RPL26BYGR034W 384 nt1.97□□□□□ -2.09
LSO1Q3E827 YLR232WYLR232W 348 nt1.97□□□□□ -2.09
LSO1Q3E827 snR190snR190 190 nt1.96□□□□□ -2.1
LSO1Q3E827 UTP22YGR090W 3714 nt1.95□□□□□ -2.1
LSO1Q3E827 YLR041WYLR041W 321 nt1.95□□□□□ -2.1
LSO1Q3E827 GEA2YEL022W 4380 nt1.95□□□□□ -2.1
LSO1Q3E827 APL3YBL037W 3078 nt1.94□□□□□ -2.1
LSO1Q3E827 SAC3YDR159W 3906 nt1.94□□□□□ -2.1
LSO1Q3E827 SWI4YER111C 3282 nt1.92□□□□□ -2.1
LSO1Q3E827 CHS1YNL192W 3396 nt1.92□□□□□ -2.1
LSO1Q3E827 YBR200W-AYBR200W-A 165 nt1.9□□□□□ -2.11
LSO1Q3E827 PMD1YER132C 5262 nt1.89□□□□□ -2.11
LSO1Q3E827 YOR093CYOR093C 4947 nt1.89□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms