Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERCC6LQ2NKX8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERCC6LQ2NKX8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 AL390961.4-201ENST00000623958 2535 ntBASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 DPP3P2-201ENST00000416030 1696 ntBASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ERCC6LQ2NKX8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.14■□□□□ 0.98
ERCC6LQ2NKX8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
ERCC6LQ2NKX8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.14■□□□□ 0.98
ERCC6LQ2NKX8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ERCC6LQ2NKX8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.14■□□□□ 0.98
ERCC6LQ2NKX8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ERCC6LQ2NKX8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
ERCC6LQ2NKX8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ERCC6LQ2NKX8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
ERCC6LQ2NKX8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
ERCC6LQ2NKX8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.14■□□□□ 0.97
ERCC6LQ2NKX8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.14■□□□□ 0.97
ERCC6LQ2NKX8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.14■□□□□ 0.97
ERCC6LQ2NKX8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ERCC6LQ2NKX8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.14■□□□□ 0.97
ERCC6LQ2NKX8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ERCC6LQ2NKX8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.14■□□□□ 0.97
ERCC6LQ2NKX8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ERCC6LQ2NKX8 SYT6-210ENST00000641643 1587 ntBASIC21.14■□□□□ 0.97
ERCC6LQ2NKX8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ERCC6LQ2NKX8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.14■□□□□ 0.97
ERCC6LQ2NKX8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ERCC6LQ2NKX8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ERCC6LQ2NKX8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ERCC6LQ2NKX8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC6LQ2NKX8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms