Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
IRX4P78413 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IRX4P78413 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IRX4P78413 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
IRX4P78413 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.75■□□□□ 0.91
IRX4P78413 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IRX4P78413 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IRX4P78413 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.75■□□□□ 0.91
IRX4P78413 AC008403.3-201ENST00000598924 454 ntBASIC20.75■□□□□ 0.91
IRX4P78413 AC243732.1-201ENST00000612648 864 ntBASIC20.75■□□□□ 0.91
IRX4P78413 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IRX4P78413 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
IRX4P78413 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.75■□□□□ 0.91
IRX4P78413 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IRX4P78413 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IRX4P78413 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
IRX4P78413 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.75■□□□□ 0.91
IRX4P78413 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
IRX4P78413 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
IRX4P78413 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.74■□□□□ 0.91
IRX4P78413 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IRX4P78413 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
IRX4P78413 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IRX4P78413 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
IRX4P78413 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IRX4P78413 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
IRX4P78413 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.74■□□□□ 0.91
IRX4P78413 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
IRX4P78413 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
IRX4P78413 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
IRX4P78413 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
IRX4P78413 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.74■□□□□ 0.91
IRX4P78413 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.74■□□□□ 0.91
IRX4P78413 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
IRX4P78413 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
IRX4P78413 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
IRX4P78413 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.74■□□□□ 0.91
IRX4P78413 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.74■□□□□ 0.91
IRX4P78413 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IRX4P78413 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.74■□□□□ 0.91
IRX4P78413 AP005212.1-201ENST00000581547 1997 ntBASIC20.74■□□□□ 0.91
IRX4P78413 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX4P78413 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.73■□□□□ 0.91
IRX4P78413 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
IRX4P78413 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX4P78413 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX4P78413 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
IRX4P78413 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.73■□□□□ 0.91
IRX4P78413 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.73■□□□□ 0.91
IRX4P78413 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.73■□□□□ 0.91
IRX4P78413 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.73■□□□□ 0.91
IRX4P78413 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX4P78413 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX4P78413 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX4P78413 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX4P78413 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX4P78413 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IRX4P78413 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.72■□□□□ 0.91
IRX4P78413 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
IRX4P78413 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
IRX4P78413 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX4P78413 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.72■□□□□ 0.91
IRX4P78413 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.72■□□□□ 0.91
IRX4P78413 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
IRX4P78413 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.72■□□□□ 0.91
IRX4P78413 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.72■□□□□ 0.91
IRX4P78413 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.72■□□□□ 0.91
IRX4P78413 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.72■□□□□ 0.91
IRX4P78413 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.72■□□□□ 0.91
IRX4P78413 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.72■□□□□ 0.91
IRX4P78413 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX4P78413 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
IRX4P78413 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX4P78413 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
IRX4P78413 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.72■□□□□ 0.91
IRX4P78413 KRT17P1-201ENST00000399211 1546 ntBASIC20.72■□□□□ 0.91
IRX4P78413 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.72■□□□□ 0.91
IRX4P78413 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
IRX4P78413 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.72■□□□□ 0.91
IRX4P78413 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
IRX4P78413 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.71■□□□□ 0.91
IRX4P78413 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
IRX4P78413 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
IRX4P78413 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
IRX4P78413 GABARAPL3-202ENST00000624044 1851 ntBASIC20.71■□□□□ 0.91
IRX4P78413 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.71■□□□□ 0.91
IRX4P78413 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
IRX4P78413 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
IRX4P78413 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
IRX4P78413 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
IRX4P78413 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IRX4P78413 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.71■□□□□ 0.91
IRX4P78413 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
IRX4P78413 MIR718-201ENST00000390190 70 ntBASIC20.71■□□□□ 0.91
IRX4P78413 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.71■□□□□ 0.91
IRX4P78413 AL355472.2-201ENST00000422958 438 ntBASIC20.71■□□□□ 0.91
IRX4P78413 ECEL1P3-201ENST00000427961 737 ntBASIC20.71■□□□□ 0.91
IRX4P78413 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.71■□□□□ 0.91
IRX4P78413 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.71■□□□□ 0.91
IRX4P78413 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms