Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPS3AP61247 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPS3AP61247 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS3AP61247 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS3AP61247 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS3AP61247 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS3AP61247 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RPS3AP61247 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS3AP61247 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS3AP61247 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPS3AP61247 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.7■□□□□ 0.58
RPS3AP61247 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS3AP61247 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS3AP61247 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.7■□□□□ 0.58
RPS3AP61247 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RPS3AP61247 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS3AP61247 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS3AP61247 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS3AP61247 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS3AP61247 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS3AP61247 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RPS3AP61247 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPS3AP61247 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS3AP61247 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS3AP61247 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS3AP61247 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS3AP61247 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.69■□□□□ 0.58
RPS3AP61247 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS3AP61247 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS3AP61247 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS3AP61247 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS3AP61247 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.69■□□□□ 0.58
RPS3AP61247 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RPS3AP61247 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.69■□□□□ 0.58
RPS3AP61247 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.69■□□□□ 0.58
RPS3AP61247 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.69■□□□□ 0.58
RPS3AP61247 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
RPS3AP61247 AC069236.1-201ENST00000604339 616 ntBASIC18.69■□□□□ 0.58
RPS3AP61247 AL591742.1-201ENST00000604433 565 ntBASIC18.69■□□□□ 0.58
RPS3AP61247 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RPS3AP61247 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.68■□□□□ 0.58
RPS3AP61247 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RPS3AP61247 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.68■□□□□ 0.58
RPS3AP61247 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.68■□□□□ 0.58
RPS3AP61247 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.68■□□□□ 0.58
RPS3AP61247 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS3AP61247 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS3AP61247 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS3AP61247 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS3AP61247 ID1-201ENST00000376105 1233 ntBASIC18.68■□□□□ 0.58
RPS3AP61247 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS3AP61247 CDV3P1-201ENST00000471403 739 ntBASIC18.68■□□□□ 0.58
RPS3AP61247 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.68■□□□□ 0.58
RPS3AP61247 AL121832.2-201ENST00000610979 668 ntBASIC18.68■□□□□ 0.58
RPS3AP61247 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.68■□□□□ 0.58
RPS3AP61247 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPS3AP61247 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.68■□□□□ 0.58
RPS3AP61247 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS3AP61247 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS3AP61247 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPS3AP61247 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS3AP61247 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS3AP61247 TNXA-203ENST00000507684 2038 ntBASIC18.67■□□□□ 0.58
RPS3AP61247 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS3AP61247 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS3AP61247 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS3AP61247 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS3AP61247 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS3AP61247 GPX1P1-201ENST00000388829 606 ntBASIC18.67■□□□□ 0.58
RPS3AP61247 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
RPS3AP61247 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.67■□□□□ 0.58
RPS3AP61247 AL162412.1-201ENST00000567129 965 ntBASIC18.67■□□□□ 0.58
RPS3AP61247 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.67■□□□□ 0.58
RPS3AP61247 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.67■□□□□ 0.58
RPS3AP61247 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RPS3AP61247 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPS3AP61247 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS3AP61247 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.67■□□□□ 0.58
RPS3AP61247 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS3AP61247 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS3AP61247 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RPS3AP61247 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPS3AP61247 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RPS3AP61247 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RPS3AP61247 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPS3AP61247 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS3AP61247 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS3AP61247 AC068338.2-201ENST00000563278 1430 ntBASIC18.66■□□□□ 0.58
RPS3AP61247 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS3AP61247 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.66■□□□□ 0.58
RPS3AP61247 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS3AP61247 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS3AP61247 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPS3AP61247 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS3AP61247 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.66■□□□□ 0.58
RPS3AP61247 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.66■□□□□ 0.58
RPS3AP61247 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RPS3AP61247 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
RPS3AP61247 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.66■□□□□ 0.58
RPS3AP61247 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms