Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.23■□□□□ 0.51
CXCR4P61073 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXCR4P61073 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXCR4P61073 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXCR4P61073 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXCR4P61073 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXCR4P61073 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CXCR4P61073 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXCR4P61073 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXCR4P61073 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.23■□□□□ 0.51
CXCR4P61073 AL355001.2-201ENST00000620617 1191 ntBASIC18.23■□□□□ 0.51
CXCR4P61073 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.23■□□□□ 0.51
CXCR4P61073 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXCR4P61073 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
CXCR4P61073 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CXCR4P61073 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CXCR4P61073 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXCR4P61073 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CXCR4P61073 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.22■□□□□ 0.51
CXCR4P61073 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 AC079598.2-202ENST00000546624 1451 ntBASIC18.22■□□□□ 0.51
CXCR4P61073 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.22■□□□□ 0.51
CXCR4P61073 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.22■□□□□ 0.51
CXCR4P61073 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.22■□□□□ 0.51
CXCR4P61073 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.22■□□□□ 0.51
CXCR4P61073 AC012414.1-201ENST00000556676 535 ntBASIC18.22■□□□□ 0.51
CXCR4P61073 AF213884.3-201ENST00000563833 479 ntBASIC18.22■□□□□ 0.51
CXCR4P61073 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.22■□□□□ 0.51
CXCR4P61073 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.22■□□□□ 0.51
CXCR4P61073 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.22■□□□□ 0.51
CXCR4P61073 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CXCR4P61073 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CXCR4P61073 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.22■□□□□ 0.51
CXCR4P61073 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.22■□□□□ 0.51
CXCR4P61073 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CXCR4P61073 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.22■□□□□ 0.51
CXCR4P61073 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CXCR4P61073 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CXCR4P61073 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CXCR4P61073 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.21■□□□□ 0.51
CXCR4P61073 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.21■□□□□ 0.51
CXCR4P61073 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CXCR4P61073 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.21■□□□□ 0.51
CXCR4P61073 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.21■□□□□ 0.51
CXCR4P61073 MIR939-201ENST00000401314 82 ntBASIC18.21■□□□□ 0.51
CXCR4P61073 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.21■□□□□ 0.51
CXCR4P61073 AC091305.1-201ENST00000479476 895 ntBASIC18.21■□□□□ 0.51
CXCR4P61073 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.21■□□□□ 0.51
CXCR4P61073 AC008175.2-201ENST00000612840 297 ntBASIC18.21■□□□□ 0.51
CXCR4P61073 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CXCR4P61073 AC116050.2-201ENST00000612102 1779 ntBASIC18.21■□□□□ 0.51
CXCR4P61073 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CXCR4P61073 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.21■□□□□ 0.51
CXCR4P61073 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.21■□□□□ 0.51
CXCR4P61073 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.21■□□□□ 0.51
CXCR4P61073 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.21■□□□□ 0.51
CXCR4P61073 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.21■□□□□ 0.51
CXCR4P61073 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CXCR4P61073 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.21■□□□□ 0.51
CXCR4P61073 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.5
CXCR4P61073 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
CXCR4P61073 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CXCR4P61073 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CXCR4P61073 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CXCR4P61073 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CXCR4P61073 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CXCR4P61073 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CXCR4P61073 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.2■□□□□ 0.5
CXCR4P61073 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CXCR4P61073 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CXCR4P61073 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CXCR4P61073 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CXCR4P61073 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CXCR4P61073 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CXCR4P61073 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CXCR4P61073 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.2■□□□□ 0.5
CXCR4P61073 POU5F1P4-201ENST00000413175 1085 ntBASIC18.2■□□□□ 0.5
CXCR4P61073 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.2■□□□□ 0.5
CXCR4P61073 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms