Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.2■□□□□ 0.98
ERVFC1P60507 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.2■□□□□ 0.98
ERVFC1P60507 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ERVFC1P60507 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERVFC1P60507 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERVFC1P60507 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.19■□□□□ 0.98
ERVFC1P60507 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ERVFC1P60507 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERVFC1P60507 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.19■□□□□ 0.98
ERVFC1P60507 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.19■□□□□ 0.98
ERVFC1P60507 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERVFC1P60507 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.19■□□□□ 0.98
ERVFC1P60507 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.19■□□□□ 0.98
ERVFC1P60507 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.19■□□□□ 0.98
ERVFC1P60507 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERVFC1P60507 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ERVFC1P60507 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.19■□□□□ 0.98
ERVFC1P60507 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.19■□□□□ 0.98
ERVFC1P60507 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERVFC1P60507 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ERVFC1P60507 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERVFC1P60507 AL024507.2-201ENST00000606070 2574 ntBASIC21.19■□□□□ 0.98
ERVFC1P60507 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERVFC1P60507 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.19■□□□□ 0.98
ERVFC1P60507 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERVFC1P60507 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERVFC1P60507 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERVFC1P60507 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ERVFC1P60507 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERVFC1P60507 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERVFC1P60507 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
ERVFC1P60507 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.18■□□□□ 0.98
ERVFC1P60507 SLC25A3P1-201ENST00000443844 931 ntBASIC21.18■□□□□ 0.98
ERVFC1P60507 AC104076.2-201ENST00000448912 469 ntBASIC21.18■□□□□ 0.98
ERVFC1P60507 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.18■□□□□ 0.98
ERVFC1P60507 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ERVFC1P60507 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.18■□□□□ 0.98
ERVFC1P60507 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.18■□□□□ 0.98
ERVFC1P60507 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ERVFC1P60507 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.18■□□□□ 0.98
ERVFC1P60507 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERVFC1P60507 KRT8P20-201ENST00000423953 1409 ntBASIC21.18■□□□□ 0.98
ERVFC1P60507 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ERVFC1P60507 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ERVFC1P60507 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERVFC1P60507 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.17■□□□□ 0.98
ERVFC1P60507 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.17■□□□□ 0.98
ERVFC1P60507 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.17■□□□□ 0.98
ERVFC1P60507 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.17■□□□□ 0.98
ERVFC1P60507 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.17■□□□□ 0.98
ERVFC1P60507 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.17■□□□□ 0.98
ERVFC1P60507 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ERVFC1P60507 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.17■□□□□ 0.98
ERVFC1P60507 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.17■□□□□ 0.98
ERVFC1P60507 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.17■□□□□ 0.98
ERVFC1P60507 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ERVFC1P60507 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERVFC1P60507 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERVFC1P60507 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERVFC1P60507 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ERVFC1P60507 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ERVFC1P60507 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.16■□□□□ 0.98
ERVFC1P60507 AL049796.1-201ENST00000565336 1766 ntBASIC21.16■□□□□ 0.98
ERVFC1P60507 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERVFC1P60507 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ERVFC1P60507 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ERVFC1P60507 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERVFC1P60507 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.16■□□□□ 0.98
ERVFC1P60507 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.16■□□□□ 0.98
ERVFC1P60507 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.16■□□□□ 0.98
ERVFC1P60507 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERVFC1P60507 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ERVFC1P60507 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERVFC1P60507 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ERVFC1P60507 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ERVFC1P60507 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERVFC1P60507 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERVFC1P60507 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERVFC1P60507 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERVFC1P60507 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERVFC1P60507 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
ERVFC1P60507 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.15■□□□□ 0.98
ERVFC1P60507 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERVFC1P60507 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ERVFC1P60507 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.15■□□□□ 0.98
ERVFC1P60507 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.15■□□□□ 0.98
ERVFC1P60507 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.15■□□□□ 0.98
ERVFC1P60507 AL121603.2-201ENST00000557373 2117 ntBASIC21.14■□□□□ 0.98
ERVFC1P60507 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
ERVFC1P60507 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.14■□□□□ 0.97
ERVFC1P60507 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.14■□□□□ 0.97
ERVFC1P60507 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ERVFC1P60507 NTF6B-201ENST00000591913 560 ntBASIC21.14■□□□□ 0.97
ERVFC1P60507 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ERVFC1P60507 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.14■□□□□ 0.97
ERVFC1P60507 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.14■□□□□ 0.97
ERVFC1P60507 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ERVFC1P60507 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ERVFC1P60507 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
ERVFC1P60507 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms