Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN6P56747 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN6P56747 AP002982.1-201ENST00000492365 877 ntBASIC19.29■□□□□ 0.68
CLDN6P56747 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN6P56747 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN6P56747 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN6P56747 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN6P56747 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN6P56747 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN6P56747 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN6P56747 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
CLDN6P56747 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN6P56747 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN6P56747 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN6P56747 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.28■□□□□ 0.68
CLDN6P56747 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN6P56747 AC010947.1-201ENST00000623454 693 ntBASIC19.28■□□□□ 0.68
CLDN6P56747 CR392000.1-201ENST00000624770 1228 ntBASIC19.28■□□□□ 0.68
CLDN6P56747 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLDN6P56747 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CLDN6P56747 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN6P56747 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN6P56747 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN6P56747 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN6P56747 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN6P56747 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN6P56747 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN6P56747 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN6P56747 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN6P56747 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN6P56747 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.27■□□□□ 0.68
CLDN6P56747 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN6P56747 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN6P56747 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.27■□□□□ 0.68
CLDN6P56747 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN6P56747 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLDN6P56747 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.27■□□□□ 0.68
CLDN6P56747 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.27■□□□□ 0.68
CLDN6P56747 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.27■□□□□ 0.68
CLDN6P56747 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN6P56747 NTF6B-201ENST00000591913 560 ntBASIC19.27■□□□□ 0.68
CLDN6P56747 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN6P56747 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CLDN6P56747 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.27■□□□□ 0.68
CLDN6P56747 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN6P56747 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN6P56747 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN6P56747 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN6P56747 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN6P56747 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN6P56747 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN6P56747 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN6P56747 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN6P56747 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN6P56747 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN6P56747 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN6P56747 AL137013.1-201ENST00000432946 1228 ntBASIC19.26■□□□□ 0.67
CLDN6P56747 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.26■□□□□ 0.67
CLDN6P56747 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.26■□□□□ 0.67
CLDN6P56747 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.26■□□□□ 0.67
CLDN6P56747 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.26■□□□□ 0.67
CLDN6P56747 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN6P56747 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.26■□□□□ 0.67
CLDN6P56747 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN6P56747 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN6P56747 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN6P56747 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN6P56747 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN6P56747 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN6P56747 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN6P56747 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLDN6P56747 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CLDN6P56747 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CLDN6P56747 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLDN6P56747 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN6P56747 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDN6P56747 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CLDN6P56747 AC104076.2-201ENST00000448912 469 ntBASIC19.25■□□□□ 0.67
CLDN6P56747 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.25■□□□□ 0.67
CLDN6P56747 NAPSB-206ENST00000562112 1266 ntBASIC19.25■□□□□ 0.67
CLDN6P56747 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDN6P56747 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN6P56747 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN6P56747 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN6P56747 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN6P56747 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN6P56747 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN6P56747 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLDN6P56747 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN6P56747 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN6P56747 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN6P56747 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN6P56747 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN6P56747 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN6P56747 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN6P56747 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN6P56747 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN6P56747 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN6P56747 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN6P56747 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms