Protein–RNA interactions for Protein: P54730

UBX4, UBX domain-containing protein 4, yeastyeast

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBX4P54730 BUD3YCL014W 4911 nt1.22□□□□□ -2.21
UBX4P54730 NOP9YJL010C 2001 nt1.22□□□□□ -2.21
UBX4P54730 YGR069WYGR069W 336 nt1.22□□□□□ -2.21
UBX4P54730 CMC4YMR194C-B 222 nt1.22□□□□□ -2.21
UBX4P54730 YOR282WYOR282W 321 nt1.22□□□□□ -2.21
UBX4P54730 YPL044CYPL044C 549 nt1.22□□□□□ -2.21
UBX4P54730 YDL196WYDL196W 330 nt1.19□□□□□ -2.22
UBX4P54730 YLR120W-AYLR120W-A 102 nt1.19□□□□□ -2.22
UBX4P54730 YNL211CYNL211C 261 nt1.19□□□□□ -2.22
UBX4P54730 YPR010C-AYPR010C-A 219 nt1.19□□□□□ -2.22
UBX4P54730 STF2YGR008C 255 nt1.18□□□□□ -2.22
UBX4P54730 HUG1YML058W-A 207 nt1.17□□□□□ -2.22
UBX4P54730 YOR231C-AYOR231C-A 201 nt1.17□□□□□ -2.22
UBX4P54730 APL1YJR005W 2103 nt1.16□□□□□ -2.22
UBX4P54730 SPT7YBR081C 3999 nt1.16□□□□□ -2.22
UBX4P54730 YOR015WYOR015W 360 nt1.16□□□□□ -2.22
UBX4P54730 RPL26BYGR034W 384 nt1.15□□□□□ -2.23
UBX4P54730 YJL197C-AYJL197C-A 282 nt1.15□□□□□ -2.23
UBX4P54730 YMR172C-AYMR172C-A 384 nt1.15□□□□□ -2.23
UBX4P54730 BEM2YER155C 6504 nt1.15□□□□□ -2.23
UBX4P54730 IML1YJR138W 4755 nt1.14□□□□□ -2.23
UBX4P54730 YDR354C-AYDR354C-A 144 nt1.14□□□□□ -2.23
UBX4P54730 YEL020C-BYEL020C-B 198 nt1.14□□□□□ -2.23
UBX4P54730 YGL052WYGL052W 306 nt1.14□□□□□ -2.23
UBX4P54730 tV(UAC)BtV(UAC)B 74 nt1.14□□□□□ -2.23
UBX4P54730 tV(UAC)DtV(UAC)D 74 nt1.14□□□□□ -2.23
UBX4P54730 SCC2YDR180W 4482 nt1.13□□□□□ -2.23
UBX4P54730 YAL067W-AYAL067W-A 228 nt1.12□□□□□ -2.23
UBX4P54730 YPR092WYPR092W 306 nt1.12□□□□□ -2.23
UBX4P54730 YER181CYER181C 324 nt1.11□□□□□ -2.23
UBX4P54730 YOR072W-BYOR072W-B 162 nt1.11□□□□□ -2.23
UBX4P54730 SIP4YJL089W 2490 nt1.1□□□□□ -2.23
UBX4P54730 PMP1YCR024C-A 123 nt1.1□□□□□ -2.23
UBX4P54730 TTI1YKL033W 3117 nt1.1□□□□□ -2.23
UBX4P54730 BFR2YDR299W 1605 nt1.09□□□□□ -2.23
UBX4P54730 YJL026C-AYJL026C-A 222 nt1.09□□□□□ -2.23
UBX4P54730 YLL019W-AYLL019W-A 93 nt1.08□□□□□ -2.24
UBX4P54730 ASE1YOR058C 2658 nt1.07□□□□□ -2.24
UBX4P54730 YDL073WYDL073W 2955 nt1.07□□□□□ -2.24
UBX4P54730 YPR117WYPR117W 7470 nt1.07□□□□□ -2.24
UBX4P54730 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
UBX4P54730 YPL152W-AYPL152W-A 99 nt1.06□□□□□ -2.24
UBX4P54730 PRP16YKR086W 3216 nt1.06□□□□□ -2.24
UBX4P54730 YCR018C-AYCR018C-A 255 nt1.05□□□□□ -2.24
UBX4P54730 YFR012W-AYFR012W-A 87 nt1.05□□□□□ -2.24
UBX4P54730 EMT1tM(CAU)D 73 nt1.05□□□□□ -2.24
UBX4P54730 EMT5tM(CAU)J1 73 nt1.05□□□□□ -2.24
UBX4P54730 EMT3tM(CAU)J2 73 nt1.05□□□□□ -2.24
UBX4P54730 EMT4tM(CAU)M 73 nt1.05□□□□□ -2.24
UBX4P54730 EMT2tM(CAU)O2 73 nt1.05□□□□□ -2.24
UBX4P54730 YML099W-AYML099W-A 330 nt1.05□□□□□ -2.24
UBX4P54730 SEC8YPR055W 3198 nt1.04□□□□□ -2.24
UBX4P54730 YMR307C-AYMR307C-A 195 nt1.03□□□□□ -2.24
UBX4P54730 snR49snR49 165 nt1.03□□□□□ -2.24
UBX4P54730 YJR029WYJR029W 5268 nt1.02□□□□□ -2.25
UBX4P54730 YPR137C-BYPR137C-B 5268 nt1.02□□□□□ -2.25
UBX4P54730 DOP1YDR141C 5097 nt1.02□□□□□ -2.25
UBX4P54730 snR74snR74 88 nt1.01□□□□□ -2.25
UBX4P54730 YDL185C-AYDL185C-A 228 nt1.01□□□□□ -2.25
UBX4P54730 snR190snR190 190 nt1.01□□□□□ -2.25
UBX4P54730 YHR063W-AYHR063W-A 336 nt1□□□□□ -2.25
UBX4P54730 snR55snR55 98 nt0.99□□□□□ -2.25
UBX4P54730 NPR2YEL062W 1848 nt0.99□□□□□ -2.25
UBX4P54730 YLR399W-AYLR399W-A 105 nt0.98□□□□□ -2.25
UBX4P54730 RKR1YMR247C 4689 nt0.98□□□□□ -2.25
UBX4P54730 UBP3YER151C 2739 nt0.98□□□□□ -2.25
UBX4P54730 YPR160W-AYPR160W-A 81 nt0.97□□□□□ -2.25
UBX4P54730 YLR282CYLR282C 342 nt0.96□□□□□ -2.26
UBX4P54730 COY1YKL179C 2040 nt0.96□□□□□ -2.26
UBX4P54730 tF(GAA)QtF(GAA)Q 75 nt0.95□□□□□ -2.26
UBX4P54730 YIR030W-AYIR030W-A 384 nt0.95□□□□□ -2.26
UBX4P54730 YKL100W-AYKL100W-A 90 nt0.95□□□□□ -2.26
UBX4P54730 YGL123C-AYGL123C-A 231 nt0.94□□□□□ -2.26
UBX4P54730 PAM16YJL104W 450 nt0.94□□□□□ -2.26
UBX4P54730 YOL155W-AYOL155W-A 135 nt0.94□□□□□ -2.26
UBX4P54730 CHS6YJL099W 2241 nt0.94□□□□□ -2.26
UBX4P54730 COX5BYIL111W 456 nt0.93□□□□□ -2.26
UBX4P54730 BLI1YKL061W 342 nt0.93□□□□□ -2.26
UBX4P54730 HAL9YOL089C 3093 nt0.92□□□□□ -2.26
UBX4P54730 YKU70YMR284W 1809 nt0.92□□□□□ -2.26
UBX4P54730 YGL188C-AYGL188C-A 141 nt0.92□□□□□ -2.26
UBX4P54730 YBR182C-AYBR182C-A 195 nt0.92□□□□□ -2.26
UBX4P54730 PAU24YBR301W 363 nt0.92□□□□□ -2.26
UBX4P54730 SEC1YDR164C 2175 nt0.91□□□□□ -2.26
UBX4P54730 YCR022CYCR022C 345 nt0.9□□□□□ -2.27
UBX4P54730 YML002WYML002W 2214 nt0.9□□□□□ -2.27
UBX4P54730 FYV10YIL097W 1551 nt0.9□□□□□ -2.27
UBX4P54730 LTE1YAL024C 4308 nt0.9□□□□□ -2.27
UBX4P54730 COX12YLR038C 252 nt0.89□□□□□ -2.27
UBX4P54730 YOR161W-AYOR161W-A 81 nt0.89□□□□□ -2.27
UBX4P54730 RPS30BYOR182C 192 nt0.89□□□□□ -2.27
UBX4P54730 PRP5YBR237W 2550 nt0.88□□□□□ -2.27
UBX4P54730 PAU12YGR294W 363 nt0.88□□□□□ -2.27
UBX4P54730 ABF2YMR072W 552 nt0.86□□□□□ -2.27
UBX4P54730 ULI1YFR026C 510 nt0.85□□□□□ -2.27
UBX4P54730 UTP20YBL004W 7482 nt0.84□□□□□ -2.27
UBX4P54730 OST4YDL232W 111 nt0.83□□□□□ -2.28
UBX4P54730 YGL041CYGL041C 204 nt0.83□□□□□ -2.28
UBX4P54730 PRP42YDR235W 1635 nt0.82□□□□□ -2.28
UBX4P54730 tF(GAA)BtF(GAA)B 73 nt0.82□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 36.7 ms