Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
ATXN1P54253 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATXN1P54253 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATXN1P54253 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATXN1P54253 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ATXN1P54253 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATXN1P54253 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.04■□□□□ 0.96
ATXN1P54253 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.04■□□□□ 0.96
ATXN1P54253 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATXN1P54253 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATXN1P54253 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATXN1P54253 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATXN1P54253 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATXN1P54253 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATXN1P54253 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.03■□□□□ 0.96
ATXN1P54253 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
ATXN1P54253 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATXN1P54253 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
ATXN1P54253 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATXN1P54253 AC091874.3-201ENST00000512672 1195 ntBASIC21.03■□□□□ 0.96
ATXN1P54253 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.03■□□□□ 0.96
ATXN1P54253 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.03■□□□□ 0.96
ATXN1P54253 C2orf69P4-201ENST00000565394 541 ntBASIC21.03■□□□□ 0.96
ATXN1P54253 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.03■□□□□ 0.96
ATXN1P54253 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATXN1P54253 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATXN1P54253 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATXN1P54253 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATXN1P54253 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.03■□□□□ 0.96
ATXN1P54253 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
ATXN1P54253 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.03■□□□□ 0.96
ATXN1P54253 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.03■□□□□ 0.96
ATXN1P54253 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.03■□□□□ 0.96
ATXN1P54253 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN1P54253 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN1P54253 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN1P54253 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.02■□□□□ 0.96
ATXN1P54253 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN1P54253 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN1P54253 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN1P54253 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN1P54253 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN1P54253 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN1P54253 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.02■□□□□ 0.96
ATXN1P54253 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ATXN1P54253 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.02■□□□□ 0.96
ATXN1P54253 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.02■□□□□ 0.96
ATXN1P54253 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.02■□□□□ 0.96
ATXN1P54253 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN1P54253 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN1P54253 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN1P54253 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ATXN1P54253 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.02■□□□□ 0.95
ATXN1P54253 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
ATXN1P54253 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ATXN1P54253 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.01■□□□□ 0.95
ATXN1P54253 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN1P54253 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN1P54253 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN1P54253 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN1P54253 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.01■□□□□ 0.95
ATXN1P54253 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN1P54253 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN1P54253 AP003097.1-201ENST00000530657 1135 ntBASIC21.01■□□□□ 0.95
ATXN1P54253 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.01■□□□□ 0.95
ATXN1P54253 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.01■□□□□ 0.95
ATXN1P54253 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN1P54253 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN1P54253 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN1P54253 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN1P54253 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN1P54253 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN1P54253 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
ATXN1P54253 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN1P54253 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN1P54253 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATXN1P54253 PTBP1P-201ENST00000554374 1601 ntBASIC21■□□□□ 0.95
ATXN1P54253 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATXN1P54253 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
ATXN1P54253 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATXN1P54253 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATXN1P54253 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATXN1P54253 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ATXN1P54253 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21■□□□□ 0.95
ATXN1P54253 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATXN1P54253 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATXN1P54253 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21■□□□□ 0.95
ATXN1P54253 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21■□□□□ 0.95
ATXN1P54253 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21■□□□□ 0.95
ATXN1P54253 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATXN1P54253 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATXN1P54253 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATXN1P54253 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATXN1P54253 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATXN1P54253 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21■□□□□ 0.95
ATXN1P54253 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ATXN1P54253 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATXN1P54253 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATXN1P54253 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATXN1P54253 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms